ENCFF551ARD

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR359CVC
Description: Part of ENCODE experiment ENCSR359CVC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 569.00 0.07 3.85 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 187.00 0.02 1.26 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 4579.00 3.93 30.95 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 20223.00 17.36 136.70 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 1519.99 1.30 10.27 89.57 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 11507.00 9.88 77.78 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 960.00 0.82 6.49 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 98.10 0.08 0.66 5.77 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 16064.00 13.79 108.59 99.95 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 5538.00 4.75 37.44 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 4985.00 4.28 33.70 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 1134.00 3.18 7.67 89.15 MEG8-251 lncRNA thyroid gland (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 172.00 0.48 1.16 58.31 MEG8-251 lncRNA thyroid gland (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 33329.00 93.52 225.29 99.16 MEG8-251 lncRNA thyroid gland (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 143.00 0.40 0.97 46.58 MEG8-251 lncRNA thyroid gland (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 30.00 0.56 0.20 100.0 SNHG14-336 lncRNA thyroid gland (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 30.00 19.35 0.20 100.0 FMN2-209 protein coding CDS not defined thyroid gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 5.00 0.23 0.03 100.0 LINC02739-203 lncRNA thyroid gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 42.00 1.95 0.28 73.68 LINC02739-203 lncRNA thyroid gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 293.00 13.61 1.98 100.0 LINC02739-203 lncRNA thyroid gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 15.00 0.70 0.10 26.32 LINC02739-203 lncRNA thyroid gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 38.00 1.76 0.26 100.0 LINC02739-203 lncRNA thyroid gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 250.00 11.61 1.69 100.0 LINC02739-203 lncRNA thyroid gland (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 248.00 19.94 1.68 100.0 SNHG10-212 lncRNA thyroid gland (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 13.00 0.64 0.09 100.0 MIR222HG-206 lncRNA thyroid gland (Tissue)