ENCFF551ARD

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR359CVC
Description: Part of ENCODE experiment ENCSR359CVC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1296.00 0.49 8.76 76.19 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 1922.00 0.72 12.99 62.65 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 174.00 75.65 1.18 83.25 MIR3142HG-201 lncRNA thyroid gland (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 801.00 8.27 5.41 100.0 MIR151A-201 miRNA thyroid gland (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 7676.00 79.22 51.89 88.09 MIR151A-201 miRNA thyroid gland (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 918.00 98.82 6.21 100.0 DENND3-221 protein coding thyroid gland (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 532.00 3.65 3.60 100.0 WDR74-204 protein coding thyroid gland (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 608.00 4.18 4.11 76.38 WDR74-204 protein coding thyroid gland (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 425.00 2.92 2.87 100.0 WDR74-204 protein coding thyroid gland (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 351.00 2.41 2.37 66.48 WDR74-204 protein coding thyroid gland (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 177.00 1.22 1.20 33.52 WDR74-204 protein coding thyroid gland (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 112.00 0.77 0.76 100.0 WDR74-204 protein coding thyroid gland (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 84.00 10.38 0.57 100.0 SCARNA9-201 lncRNA thyroid gland (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 30966.00 96.65 209.32 100.0 TAF1D-215 retained intron thyroid gland (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 17389.00 71.99 117.54 74.42 ENST00000548801 lncRNA thyroid gland (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 904.00 19.89 6.11 100.0 ENST00000554988 lncRNA thyroid gland (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 266.00 5.85 1.80 100.0 ENST00000554988 lncRNA thyroid gland (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 161.00 0.39 1.09 100.0 SNHG14-220 retained intron thyroid gland (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 1976.00 4.83 13.36 100.0 SNHG14-220 retained intron thyroid gland (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 36926.00 90.18 249.61 100.0 SNHG14-220 retained intron thyroid gland (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 277.00 0.68 1.87 100.0 SNHG14-220 retained intron thyroid gland (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 326.00 98.19 2.20 100.0 TEKT4P2-201 transcribed unprocessed pseudogene thyroid gland (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 5.00 0.01 0.03 100.0 RPL4-202 retained intron thyroid gland (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 578.00 1.73 3.91 100.0 RPL4-202 retained intron thyroid gland (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 25349.00 75.77 171.35 92.62 RPL4-202 retained intron thyroid gland (Tissue)