ENCFF551ARD

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR359CVC
Description: Part of ENCODE experiment ENCSR359CVC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 1088.00 0.45 7.35 44.72 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 7.00 0.00 0.05 100.0 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 6854.00 2.84 46.33 59.06 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 8.00 10.53 0.05 100.0 RPS8-207 protein coding CDS not defined thyroid gland (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 169.00 22.44 1.14 100.0 RPL7A-206 protein coding CDS not defined thyroid gland (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 237.00 31.47 1.60 100.0 RPL7A-206 protein coding CDS not defined thyroid gland (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 32.00 4.25 0.22 100.0 RPL7A-206 protein coding CDS not defined thyroid gland (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 3991.00 1.58 26.98 100.0 RPL21-209 retained intron thyroid gland (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 228137.00 90.59 1542.13 96.1 RPL21-209 retained intron thyroid gland (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 399.00 0.16 2.70 100.0 RPL21-209 retained intron thyroid gland (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 17144.00 6.81 115.89 97.4 RPL21-209 retained intron thyroid gland (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 5.00 0.00 0.03 100.0 RPL21-209 retained intron thyroid gland (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 5.00 35.71 0.03 100.0 GABRE-209 retained intron thyroid gland (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 91.00 4.09 0.62 100.0 RPL13A-212 retained intron thyroid gland (Tissue)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 55.00 2.47 0.37 100.0 RPL13A-212 retained intron thyroid gland (Tissue)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 305.00 13.71 2.06 100.0 RPL13A-212 retained intron thyroid gland (Tissue)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 163.00 17.97 1.10 100.0 RPL7A-207 protein coding CDS not defined thyroid gland (Tissue)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 123.00 13.56 0.83 100.0 RPL7A-207 protein coding CDS not defined thyroid gland (Tissue)
ENST00000493449.5 ENST00000493449.5_96_109_+ 96–109 63.00 86.30 0.43 100.0 RGS11-208 retained intron thyroid gland (Tissue)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 16083.00 82.83 108.72 96.72 NOP56-217 protein coding CDS not defined thyroid gland (Tissue)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 10.00 0.05 0.07 15.87 NOP56-217 protein coding CDS not defined thyroid gland (Tissue)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 2056.00 6.06 13.90 100.0 RABGGTB-213 protein coding CDS not defined thyroid gland (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 438.00 1.29 2.96 43.93 RABGGTB-213 protein coding CDS not defined thyroid gland (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 17259.00 50.90 116.66 79.35 RABGGTB-213 protein coding CDS not defined thyroid gland (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 533.00 1.57 3.60 100.0 RABGGTB-213 protein coding CDS not defined thyroid gland (Tissue)