ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 35.00 0.01 0.17 100.0 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 37776.00 12.53 188.47 71.75 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 215.00 28.48 1.07 100.0 RPL7A-206 protein coding CDS not defined uterus (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 25.00 3.31 0.12 100.0 RPL7A-206 protein coding CDS not defined uterus (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 235.00 31.13 1.17 100.0 RPL7A-206 protein coding CDS not defined uterus (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 25138.00 5.96 125.42 96.22 RPL21-209 retained intron uterus (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 5397.00 1.28 26.93 100.0 RPL21-209 retained intron uterus (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 387646.00 91.93 1933.99 96.11 RPL21-209 retained intron uterus (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 1.00 0.00 0.00 100.0 RPL21-209 retained intron uterus (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 613.00 0.15 3.06 100.0 RPL21-209 retained intron uterus (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 10.00 47.62 0.05 100.0 GABRE-209 retained intron uterus (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 146.00 5.37 0.73 100.0 RPL13A-212 retained intron uterus (Tissue)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 116.00 4.27 0.58 100.0 RPL13A-212 retained intron uterus (Tissue)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 331.00 12.18 1.65 100.0 RPL13A-212 retained intron uterus (Tissue)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 220.00 20.16 1.10 100.0 RPL7A-207 protein coding CDS not defined uterus (Tissue)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 120.00 11.00 0.60 100.0 RPL7A-207 protein coding CDS not defined uterus (Tissue)
ENST00000493449.5 ENST00000493449.5_96_109_+ 96–109 671.00 94.51 3.35 100.0 RGS11-208 retained intron uterus (Tissue)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 18596.00 77.86 92.78 92.62 NOP56-217 protein coding CDS not defined uterus (Tissue)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 14.00 0.06 0.07 13.73 NOP56-217 protein coding CDS not defined uterus (Tissue)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 587.00 1.21 2.93 65.08 RABGGTB-213 protein coding CDS not defined uterus (Tissue)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 1801.00 3.71 8.99 100.0 RABGGTB-213 protein coding CDS not defined uterus (Tissue)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 3085.00 6.35 15.39 100.0 RABGGTB-213 protein coding CDS not defined uterus (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 315.00 0.65 1.57 34.92 RABGGTB-213 protein coding CDS not defined uterus (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 30531.00 62.83 152.32 83.92 RABGGTB-213 protein coding CDS not defined uterus (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 679.00 1.40 3.39 100.0 RABGGTB-213 protein coding CDS not defined uterus (Tissue)