ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 3093.38 23.35 12.82 76.15 ENST00000823801 lncRNA spleen (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 333.00 64.53 1.38 78.35 ENST00000827714 lncRNA spleen (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 92.00 17.83 0.38 21.65 ENST00000827714 lncRNA spleen (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 553.00 1.31 2.29 100.0 GAS5-377 lncRNA spleen (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 24.00 0.06 0.10 100.0 GAS5-377 lncRNA spleen (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 3917.00 9.31 16.23 100.0 GAS5-377 lncRNA spleen (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 35956.00 85.45 149.00 100.0 GAS5-377 lncRNA spleen (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 135.00 1.86 0.56 100.0 ZFAS1-238 lncRNA spleen (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 47.00 0.65 0.19 100.0 ZFAS1-238 lncRNA spleen (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 2931.00 40.45 12.15 100.0 ZFAS1-238 lncRNA spleen (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 14639.00 92.63 60.67 100.0 ZFAS1-242 lncRNA spleen (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 7.00 0.04 0.03 100.0 ZFAS1-242 lncRNA spleen (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 838.00 42.17 3.47 100.0 ENST00000837997 lncRNA spleen (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 541.00 27.23 2.24 100.0 ENST00000837997 lncRNA spleen (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 2479.00 67.62 10.27 75.26 ENST00000839036 lncRNA spleen (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 24.00 13.41 0.10 100.0 ENST00000849527 lncRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 159900.00 92.50 662.64 98.53 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 17.00 0.01 0.07 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 26.00 0.00 0.11 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 1182.00 35.29 4.90 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 1646.00 49.15 6.82 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 78.00 12.68 0.32 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 187.00 3.87 0.77 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 674.00 26.83 2.79 63.64 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 138.00 0.02 0.57 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA spleen (Tissue)