ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 666.08 2.16 2.76 34.23 ENST00000756336 lncRNA spleen (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 5572.80 18.10 23.09 75.59 ENST00000756336 lncRNA spleen (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 1729.65 5.62 7.17 68.1 ENST00000756336 lncRNA spleen (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 38.00 55.07 0.16 100.0 ENST00000756452 lncRNA spleen (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 4382.00 41.52 18.16 100.0 ENST00000760093 lncRNA spleen (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 763.00 7.23 3.16 100.0 ENST00000760093 lncRNA spleen (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 24206.00 13.23 100.31 83.58 LINC02806-241 lncRNA spleen (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 106.00 0.06 0.44 100.0 LINC02806-241 lncRNA spleen (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 2.00 0.00 0.01 100.0 LINC02806-241 lncRNA spleen (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 141338.00 77.27 585.72 89.14 LINC02806-241 lncRNA spleen (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 2446.00 96.03 10.14 100.0 EHBP1-AS1-210 lncRNA spleen (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 152.00 3.77 0.63 100.0 ENST00000770398 lncRNA spleen (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 966.00 23.98 4.00 100.0 ENST00000770398 lncRNA spleen (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 1658.00 41.15 6.87 100.0 ENST00000770398 lncRNA spleen (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 576.00 2.00 2.39 100.0 ENST00000771298 lncRNA spleen (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 503.00 1.75 2.08 100.0 ENST00000771298 lncRNA spleen (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 19945.00 69.31 82.65 85.78 ENST00000771298 lncRNA spleen (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 696.00 2.42 2.88 100.0 ENST00000771298 lncRNA spleen (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 92.00 6.79 0.38 100.0 ENST00000772672 lncRNA spleen (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 941.00 77.96 3.90 100.0 ENST00000773843 lncRNA spleen (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 441359.00 40.61 1829.03 88.89 SNHG12-223 lncRNA spleen (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 640265.00 58.91 2653.32 98.75 SNHG12-223 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 69097.00 66.05 286.34 100.0 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 230.00 0.22 0.95 38.66 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 1094.00 1.05 4.53 100.0 SNHG25-206 lncRNA spleen (Tissue)