ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 4309.00 91.18 17.86 96.14 MIR130A-201 miRNA spleen (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 387.00 8.19 1.60 51.95 MIR130A-201 miRNA spleen (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 406121.00 96.97 1683.00 97.7 MIRLET7F2-201 miRNA spleen (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 266.00 70.93 1.10 100.0 MIR652-201 miRNA spleen (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 2049.00 68.46 8.49 100.0 MIR140-201 miRNA spleen (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 392.00 38.89 1.62 58.25 MIR106B-201 miRNA spleen (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 15.00 1.49 0.06 100.0 MIR106B-201 miRNA spleen (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 310.00 61.39 1.28 100.0 SNORD41-201 snoRNA spleen (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 793.00 5.55 3.29 39.59 MT-TF-201 Mt tRNA spleen (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 1073.00 7.51 4.45 100.0 MT-TF-201 Mt tRNA spleen (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 5837.00 40.83 24.19 75.28 MT-TF-201 Mt tRNA spleen (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 3045.00 60.34 12.62 100.0 MT-TV-201 Mt tRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 273.00 0.99 1.13 100.0 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 43.00 0.16 0.18 100.0 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 9522.00 34.46 39.46 89.75 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 8125.00 29.41 33.67 82.36 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 25.00 0.09 0.10 100.0 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 793.00 2.87 3.29 100.0 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 82.00 0.30 0.34 100.0 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 1277.00 66.03 5.29 98.69 MT-TI-201 Mt tRNA spleen (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 42.00 2.17 0.17 100.0 MT-TI-201 Mt tRNA spleen (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 3671.42 13.10 15.21 63.27 MT-TQ-201 Mt tRNA spleen (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 61.00 0.22 0.25 100.0 MT-TQ-201 Mt tRNA spleen (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 15741.00 56.15 65.23 86.05 MT-TQ-201 Mt tRNA spleen (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 1646.83 5.87 6.82 47.11 MT-TQ-201 Mt tRNA spleen (Tissue)