ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 577.00 6.11 5.86 93.21 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 18.00 31.58 0.18 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 27.00 42.86 0.27 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 115.00 6.84 1.17 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 4.00 0.04 0.04 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 103.00 1.09 1.05 14.27 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 171.00 27.10 1.74 98.28 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 4.00 0.63 0.04 2.29 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 515.00 33.23 5.23 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 3105.00 7.88 31.52 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 9398.00 23.85 95.40 84.54 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 28.00 7.98 0.28 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 12.00 4.30 0.12 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 13.00 0.17 0.13 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 3272.00 41.90 33.21 91.58 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 26.00 0.33 0.26 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 414.00 5.30 4.20 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 67.00 0.86 0.68 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 762.00 9.76 7.74 48.05 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 183.00 2.34 1.86 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 277.00 14.00 2.81 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 474.00 23.96 4.81 59.92 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 138.00 7.66 1.40 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 65.00 2.17 0.66 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 5.00 0.17 0.05 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA OCI-LY7 (Cell line)