ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 464.00 3.91 4.71 100.0 SNORD3C-201 snoRNA OCI-LY7 (Cell line)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 17.46 0.04 0.18 58.2 RPL23A-208 retained intron OCI-LY7 (Cell line)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 11.24 0.03 0.11 62.44 RPL23A-208 retained intron OCI-LY7 (Cell line)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 25697.00 58.16 260.85 69.32 RPL23A-208 retained intron OCI-LY7 (Cell line)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 17518.00 39.65 177.83 84.83 RPL23A-208 retained intron OCI-LY7 (Cell line)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 251.00 0.48 2.55 5.18 RPL17-211 retained intron OCI-LY7 (Cell line)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 91.00 0.18 0.92 14.77 RPL17-211 retained intron OCI-LY7 (Cell line)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 841.00 1.62 8.54 100.0 RPL17-211 retained intron OCI-LY7 (Cell line)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 41511.00 79.85 421.38 99.57 RPL17-211 retained intron OCI-LY7 (Cell line)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 6111.00 11.75 62.03 99.37 RPL17-211 retained intron OCI-LY7 (Cell line)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 316.00 4.28 3.21 100.0 RPL17-214 retained intron OCI-LY7 (Cell line)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 1907.30 25.84 19.36 37.96 RPL17-214 retained intron OCI-LY7 (Cell line)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 3747.25 50.76 38.04 63.46 RPL17-214 retained intron OCI-LY7 (Cell line)
ENST00000583861.1 ENST00000583861.1_27_62_+ 27–62 63.00 0.02 0.64 100.0 SNORD43-201 snoRNA OCI-LY7 (Cell line)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 384590.00 98.62 3903.97 99.78 SNORD43-201 snoRNA OCI-LY7 (Cell line)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 224.00 0.06 2.27 100.0 SNORD43-201 snoRNA OCI-LY7 (Cell line)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 3.00 100.00 0.03 100.0 MIR151B-201 miRNA OCI-LY7 (Cell line)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 532.00 3.77 5.40 100.0 SNORD3A-201 snoRNA OCI-LY7 (Cell line)
ENST00000585078.1 ENST00000585078.1_1_83_+ 1–83 1615.00 62.89 16.39 100.0 SNORD92-201 snoRNA OCI-LY7 (Cell line)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 473.00 30.30 4.80 100.0 NSRP1-214 protein coding OCI-LY7 (Cell line)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 670.00 42.92 6.80 78.18 NSRP1-214 protein coding OCI-LY7 (Cell line)
ENST00000587762.2 ENST00000587762.2_6337_6420_+ 6337–6420 33.00 26.83 0.33 100.0 MIR23AHG-201 lncRNA OCI-LY7 (Cell line)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 3.00 2.44 0.03 75.0 MIR23AHG-201 lncRNA OCI-LY7 (Cell line)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 12.00 9.76 0.12 80.0 MIR23AHG-201 lncRNA OCI-LY7 (Cell line)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 3.00 2.44 0.03 100.0 MIR23AHG-201 lncRNA OCI-LY7 (Cell line)