ENCFF518LYU

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 2678.00 23.54 2.24 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 138.00 1.21 0.12 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 579.00 57.50 0.49 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 1395.00 69.33 1.17 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 428.00 23.91 0.36 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 1135.00 1.47 0.95 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 56.00 0.07 0.05 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 354.00 0.46 0.30 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 6268.00 8.10 5.25 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 290.00 0.37 0.24 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 978.00 1.26 0.82 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 45886.00 5.38 38.44 96.94 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 146.00 0.02 0.12 66.06 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 64.00 0.01 0.05 65.31 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 22396.00 26.59 18.76 84.72 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 1065.00 93.34 0.89 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 92.00 10.50 0.08 40.89 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 1197.00 95.91 1.00 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 1349.00 2.42 1.13 80.15 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 334.00 0.60 0.28 19.85 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 36076.00 64.71 30.22 85.59 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 1758.21 8.88 1.47 13.31 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 344.00 1.74 0.29 51.57 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 13660.55 68.96 11.44 91.75 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 68988.00 85.29 57.80 87.23 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA hepatocyte (In vitro differentiated cells)