ENCFF511CAA

Library Details

Organism: Homo Sapiens
Biosample: neuronal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR291IZK
Description: Part of ENCODE experiment ENCSR291IZK.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000688371.3 ENST00000688371.3_313_335_+ 313–335 3293.00 1.72 25.45 37.26 MIR302CHG-205 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_485_+ 458–485 140.00 0.07 1.08 100.0 MIR302CHG-205 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 17962.20 9.37 138.82 52.19 MIR302CHG-205 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_313_333_+ 313–333 5545.00 2.89 42.85 77.85 MIR302CHG-205 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 14532.09 7.58 112.31 52.05 MIR302CHG-205 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 40258.00 20.99 311.13 100.0 MIR302CHG-205 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 26896.00 14.03 207.87 96.48 MIR302CHG-205 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 48628.00 25.36 375.82 90.96 MIR302CHG-205 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_490_+ 458–490 13.00 0.01 0.10 100.0 MIR302CHG-205 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_481_+ 458–481 8754.00 4.56 67.66 33.42 MIR302CHG-205 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 4479.00 59.04 34.62 100.0 RPSA-216 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 1.00 100.00 0.01 100.0 MIR99AHG-370 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 11441.00 98.93 88.42 100.0 HPS4-237 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 2681.00 88.10 20.72 100.0 MEG8-253 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 657.00 27.33 5.08 100.0 MEG9-206 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 384.00 15.97 2.97 100.0 MEG9-206 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 238.00 9.90 1.84 100.0 MEG9-206 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 6468.00 13.19 49.99 100.0 DNAJC5-203 nonsense mediated decay neuronal stem cell (In vitro differentiated cells)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 130.00 4.00 1.00 100.0 ENST00000707189 TEC neuronal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 7605.00 0.20 58.78 100.0 MIR17HG-214 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 3.00 0.00 0.02 100.0 MIR17HG-214 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 2324144.27 60.71 17962.16 64.39 MIR17HG-214 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 1654.00 0.04 12.78 100.0 MIR17HG-214 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 1361.00 0.04 10.52 100.0 MIR17HG-214 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 1467449.27 38.33 11341.19 39.92 MIR17HG-214 lncRNA neuronal stem cell (In vitro differentiated cells)