ENCFF511CAA

Library Details

Organism: Homo Sapiens
Biosample: neuronal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR291IZK
Description: Part of ENCODE experiment ENCSR291IZK.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 221.00 16.06 1.71 69.72 MIR23AHG-201 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 316.00 22.97 2.44 81.23 MIR23AHG-201 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 94.00 6.83 0.73 59.87 MIR23AHG-201 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 195.00 14.17 1.51 84.05 MIR23AHG-201 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 474.00 55.31 3.66 100.0 ODAD3-204 nonsense mediated decay neuronal stem cell (In vitro differentiated cells)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 186.00 1.15 1.44 100.0 VMP1-217 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 12198.00 75.36 94.27 78.78 VMP1-217 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 3779.00 20.41 29.21 100.0 C19orf48P-203 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 53.29 0.29 0.41 85.94 C19orf48P-203 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 24.22 0.13 0.19 35.61 C19orf48P-203 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 5015.00 27.09 38.76 100.0 C19orf48P-203 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 160.00 68.67 1.24 100.0 ENST00000597420 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 404.00 67.45 3.12 68.94 CARMN-209 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 44.00 32.59 0.34 100.0 PPFIA1P1-201 processed pseudogene neuronal stem cell (In vitro differentiated cells)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 2.00 0.36 0.02 100.0 SNORD114-21-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 386.00 69.42 2.98 100.0 SNORD114-21-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 10.00 50.00 0.08 100.0 MIR98-201 miRNA neuronal stem cell (In vitro differentiated cells)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 1547.00 91.43 11.96 100.0 MIR15A-201 miRNA neuronal stem cell (In vitro differentiated cells)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 80.00 86.02 0.62 100.0 MIR376C-201 miRNA neuronal stem cell (In vitro differentiated cells)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 1538.00 63.11 11.89 100.0 SNHG21-206 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 1.00 0.14 0.01 100.0 SNORD91B-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 6.00 20.69 0.05 100.0 MIR219A2HG-201 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 1.00 0.08 0.01 50.0 SNORD91A-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 2787.00 47.63 21.54 98.24 MIR486-1-201 miRNA neuronal stem cell (In vitro differentiated cells)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 4.00 0.02 0.03 66.67 NOP56-219 retained intron neuronal stem cell (In vitro differentiated cells)