ENCFF511CAA

Library Details

Organism: Homo Sapiens
Biosample: neuronal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR291IZK
Description: Part of ENCODE experiment ENCSR291IZK.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 306.00 2.76 2.36 100.0 SNHG14-220 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 5.00 0.05 0.04 100.0 SNHG14-220 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 3.00 0.03 0.02 100.0 SNHG14-220 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 49.00 94.23 0.38 100.0 TEKT4P2-201 transcribed unprocessed pseudogene neuronal stem cell (In vitro differentiated cells)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 1278.00 16.03 9.88 100.0 RPL4-202 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 2407.00 30.20 18.60 100.0 RPL4-202 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 357.00 4.48 2.76 100.0 RPL4-202 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 67.00 0.84 0.52 95.71 RPL4-202 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 58.00 0.73 0.45 100.0 RPL4-202 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 6699.00 21.22 51.77 100.0 ENST00000563103 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 40.00 0.51 0.31 100.0 RPL4-207 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 24.00 0.31 0.19 100.0 RPL4-207 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 20.00 1.99 0.15 62.5 ENST00000565336 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 7.00 0.70 0.05 70.0 ENST00000565336 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 19.00 0.20 0.15 100.0 RBMX-210 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 1048.00 10.79 8.10 100.0 RBMX-210 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 3955.00 40.70 30.57 100.0 RBMX-210 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 16.00 0.47 0.12 100.0 RPL4-214 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 2.68 0.33 0.02 66.88 POLG-DT-202 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 9.31 1.16 0.07 54.78 POLG-DT-202 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 4401.00 36.08 34.01 100.0 ENST00000570843 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 39.00 27.27 0.30 100.0 MIR497HG-207 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 37087.00 99.57 286.63 99.75 MIR22HG-212 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 166.00 21.99 1.28 77.21 SNORD53B-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 49.00 6.49 0.38 22.79 SNORD53B-201 snoRNA neuronal stem cell (In vitro differentiated cells)