ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 50.00 27.03 0.20 100.0 MIR887-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 28.00 77.78 0.11 100.0 MIR889-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 1316.00 51.89 5.20 100.0 SNORD111-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 1095.00 50.58 4.33 72.81 SNORD88A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 74.00 100.00 0.29 100.0 MIR548K-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 217.00 68.24 0.86 100.0 MIR320B2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 73.00 93.59 0.29 100.0 MIR1271-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 20738.00 85.04 81.98 100.0 SNORD100-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1759.00 7.21 6.95 100.0 SNORD100-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 67.00 0.27 0.26 100.0 SNORD100-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 244.00 1.00 0.96 100.0 SNORD100-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 6801.00 71.47 26.88 100.0 SNORD111B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 67.00 1.97 0.26 100.0 RNU2-36P-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 193.00 5.67 0.76 100.0 RNU2-36P-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 116153.00 96.50 459.15 98.65 SNORD19C-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 765.00 0.64 3.02 100.0 SNORD19C-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 2661.00 4.07 10.52 100.0 SNORD12B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 53281.00 81.56 210.62 96.39 SNORD12B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 3264.00 5.00 12.90 100.0 SNORD12B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 18.00 3.47 0.07 100.0 Y_RNA.609-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 60.00 37.97 0.24 100.0 Y_RNA.612-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 280.00 0.70 1.11 100.0 SNORD71-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 61.00 0.15 0.24 100.0 SNORD71-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 39189.00 97.37 154.91 99.75 SNORD71-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 682.00 24.44 2.70 62.74 MIR194-2HG-201 lncRNA esophagus squamous epithelium (Tissue)