ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 10389.00 28.79 41.07 91.92 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 984.00 2.73 3.89 100.0 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 7292.00 20.21 28.82 56.43 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 223.00 30.51 0.88 100.0 MT-TD-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 143.00 0.94 0.57 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 4651.00 30.50 18.39 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 4519.00 29.63 17.86 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 83.00 0.54 0.33 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 929.00 13.84 3.67 85.54 MT-TS2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 317.00 4.72 1.25 100.0 MT-TS2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 333.00 4.96 1.32 100.0 MT-TS2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 173.00 7.14 0.68 100.0 MT-TL2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 1229.00 0.13 4.86 80.8 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 292.00 0.03 1.15 22.31 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 25.00 0.00 0.10 100.0 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 813333.00 88.23 3215.07 92.4 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 1131.00 0.12 4.47 100.0 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 423.00 0.05 1.67 100.0 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 2170.00 0.24 8.58 88.39 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 6.00 85.71 0.02 100.0 MIR196A1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 997.00 7.98 3.94 100.0 MT-RNR1-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 2783.00 22.29 11.00 100.0 MT-RNR1-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 113.00 67.66 0.45 100.0 MIR454-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 222.00 68.10 0.88 100.0 MIR501-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 637.00 89.97 2.52 100.0 MIR769-201 miRNA esophagus squamous epithelium (Tissue)