ENCFF503PBD

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 64370.00 62.08 610.32 100.0 SNHG32-223 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 1519.00 1.47 14.40 100.0 SNHG32-223 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 110.00 0.11 1.04 100.0 SNHG32-223 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 23.00 0.02 0.22 92.0 SNHG32-223 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 27811.00 26.82 263.69 100.0 SNHG32-223 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 500.00 6.39 4.74 99.4 SNHG32-227 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 4064.00 51.94 38.53 100.0 SNHG32-227 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 7.00 0.09 0.07 100.0 SNHG32-227 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 625.00 7.99 5.93 100.0 SNHG32-227 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 144.00 69.57 1.37 100.0 B4GALT1-203 nonsense mediated decay mesendoderm (In vitro differentiated cells)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 272.00 2.05 2.58 100.0 ENST00000722183 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 5027.00 37.91 47.66 83.41 ENST00000722183 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 1008.00 7.60 9.56 100.0 ENST00000722183 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 5296.00 95.34 50.21 100.0 MIR34BHG-202 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 129363.00 70.76 1226.54 77.27 THBS3-AS1-228 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 4755.00 43.70 45.08 100.0 MIR200CHG-202 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 2292.00 21.06 21.73 100.0 MIR200CHG-202 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 888.00 34.61 8.42 100.0 SNHG16-266 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 296.00 11.54 2.81 100.0 SNHG16-266 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 62.00 2.42 0.59 100.0 SNHG16-266 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 13.00 48.15 0.12 100.0 MEG8-261 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 573.00 54.68 5.43 100.0 NR2F2-AS1-327 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 2.00 0.05 0.02 10.53 ENST00000747675 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 79.00 1.93 0.75 100.0 ENST00000747675 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 3.00 0.07 0.03 60.0 ENST00000747675 lncRNA mesendoderm (In vitro differentiated cells)