ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 1111.00 85.66 2.21 100.0 MIR196A2-201 miRNA Peyer's patch (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 236.00 69.01 0.47 100.0 MIR577-201 miRNA Peyer's patch (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 22.00 56.41 0.04 75.86 MIR654-201 miRNA Peyer's patch (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 205.00 95.79 0.41 95.79 MIR204-201 miRNA Peyer's patch (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 431.00 97.29 0.86 100.0 MIR152-201 miRNA Peyer's patch (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 13.00 100.00 0.03 100.0 MIR138-1-201 miRNA Peyer's patch (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 1160.00 91.19 2.31 100.0 MIR30C1-201 miRNA Peyer's patch (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 7.00 58.33 0.01 100.0 MIR660-201 miRNA Peyer's patch (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 199.00 11.87 0.40 100.0 MIR125B1-201 miRNA Peyer's patch (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 1076.00 64.20 2.14 80.3 MIR125B1-201 miRNA Peyer's patch (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 3.00 100.00 0.01 100.0 MIR493-201 miRNA Peyer's patch (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 20586.53 71.53 40.99 75.04 MIR182-201 miRNA Peyer's patch (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 5434.87 18.88 10.82 21.89 MIR182-201 miRNA Peyer's patch (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 5175.00 90.87 10.30 93.89 MIR100-201 miRNA Peyer's patch (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 24.00 100.00 0.05 100.0 MIR301A-201 miRNA Peyer's patch (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 90.00 6.17 0.18 38.63 MIR130A-201 miRNA Peyer's patch (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 1353.00 92.73 2.69 98.19 MIR130A-201 miRNA Peyer's patch (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 79665.00 98.20 158.62 98.68 MIRLET7F2-201 miRNA Peyer's patch (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 78.00 69.64 0.16 100.0 MIR652-201 miRNA Peyer's patch (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 3.00 100.00 0.01 100.0 MIR653-201 miRNA Peyer's patch (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1455.00 85.09 2.90 100.0 MIR140-201 miRNA Peyer's patch (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 8.00 2.24 0.02 100.0 MIR106B-201 miRNA Peyer's patch (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 109.00 30.53 0.22 61.93 MIR106B-201 miRNA Peyer's patch (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 5930.00 72.57 11.81 100.0 SNORD41-201 snoRNA Peyer's patch (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 828.00 19.93 1.65 73.6 MT-TF-201 Mt tRNA Peyer's patch (Tissue)