ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 59.00 0.13 0.12 100.0 RNA5SP202-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 598.93 1.30 1.19 43.15 RNA5SP202-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 714.00 1.55 1.42 100.0 RNA5SP202-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 137.00 0.30 0.27 100.0 RNA5SP202-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 2648.00 62.48 5.27 100.0 SNORD114-9-201 snoRNA Peyer's patch (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 945.00 22.30 1.88 100.0 SNORD114-9-201 snoRNA Peyer's patch (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 977.00 19.83 1.95 100.0 Y_RNA.234-201 misc RNA Peyer's patch (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 44.00 3.17 0.09 100.0 RNA5SP141-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 495.00 80.10 0.99 100.0 SNORD114-15-201 snoRNA Peyer's patch (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 17.00 4.52 0.03 100.0 ENST00000364722 snoRNA Peyer's patch (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 131.00 43.96 0.26 100.0 SNORD113-3-201 snoRNA Peyer's patch (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 2594.00 75.67 5.16 100.0 SNORD52-201 snoRNA Peyer's patch (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 1107.00 18.62 2.20 100.0 SNORD114-3-201 snoRNA Peyer's patch (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 4107.00 69.07 8.18 100.0 SNORD114-3-201 snoRNA Peyer's patch (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 67.00 1.13 0.13 100.0 SNORD114-3-201 snoRNA Peyer's patch (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 84.00 12.12 0.17 100.0 RNA5SP298-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 359.00 64.80 0.71 100.0 SNORD113-9-201 snoRNA Peyer's patch (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 38513.00 86.18 76.68 100.0 SNORD38A-201 snoRNA Peyer's patch (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 3422.00 7.66 6.81 100.0 SNORD38A-201 snoRNA Peyer's patch (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 707.00 1.58 1.41 100.0 SNORD38A-201 snoRNA Peyer's patch (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 3738.00 93.17 7.44 100.0 SNORD114-20-201 snoRNA Peyer's patch (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 32.00 0.27 0.06 100.0 7SK.1-201 misc RNA Peyer's patch (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 2856.00 24.29 5.69 83.17 7SK.1-201 misc RNA Peyer's patch (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 2047.00 17.41 4.08 77.98 7SK.1-201 misc RNA Peyer's patch (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 2435.00 20.71 4.85 66.08 7SK.1-201 misc RNA Peyer's patch (Tissue)