ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 2.00 10.53 0.00 100.0 MIR205HG-245 lncRNA Peyer's patch (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 252.00 3.90 0.50 100.0 ZFAS1-238 lncRNA Peyer's patch (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 46.00 0.71 0.09 100.0 ZFAS1-238 lncRNA Peyer's patch (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1331.00 20.58 2.65 100.0 ZFAS1-238 lncRNA Peyer's patch (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 9778.00 90.37 19.47 100.0 ZFAS1-242 lncRNA Peyer's patch (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 10.00 0.09 0.02 100.0 ZFAS1-242 lncRNA Peyer's patch (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 590.00 48.32 1.17 100.0 ENST00000837997 lncRNA Peyer's patch (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 240.00 19.66 0.48 100.0 ENST00000837997 lncRNA Peyer's patch (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 3121.00 71.60 6.21 79.48 ENST00000839036 lncRNA Peyer's patch (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 104.00 14.86 0.21 100.0 ENST00000849527 lncRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 144849.00 88.41 288.41 91.73 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 13.00 0.01 0.03 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 10.00 0.00 0.02 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 820.00 13.80 1.63 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 4495.00 75.62 8.95 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 39.00 8.76 0.08 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 46.00 2.32 0.09 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 4628.00 83.39 9.21 92.63 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 121.00 0.00 0.24 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 3.00 27.27 0.01 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 1734.00 14.42 3.45 88.11 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 3.00 0.02 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 140.00 1.16 0.28 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 72.00 11.25 0.14 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 38.00 0.01 0.08 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA Peyer's patch (Tissue)