ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 770.00 33.09 1.53 99.74 MIR126-201 miRNA Peyer's patch (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 3.00 12.00 0.01 100.0 MIR374A-201 miRNA Peyer's patch (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 348.00 69.60 0.69 100.0 MIR31-201 miRNA Peyer's patch (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 111.00 0.23 0.22 94.07 RNA5S12-201 rRNA Peyer's patch (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 266.49 0.56 0.53 55.4 RNA5S12-201 rRNA Peyer's patch (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 1028.00 2.16 2.05 41.32 RNA5S12-201 rRNA Peyer's patch (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 291.65 0.61 0.58 44.73 RNA5S12-201 rRNA Peyer's patch (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 524.00 1.10 1.04 80.0 RNA5S12-201 rRNA Peyer's patch (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 6.00 0.01 0.01 100.0 RNA5S12-201 rRNA Peyer's patch (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 37.00 0.08 0.07 97.37 RNA5S12-201 rRNA Peyer's patch (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 94.00 0.20 0.19 100.0 RNA5S12-201 rRNA Peyer's patch (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 5376.00 11.29 10.70 78.64 RNA5S12-201 rRNA Peyer's patch (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 44.00 0.09 0.09 100.0 RNA5S12-201 rRNA Peyer's patch (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 56.00 20.97 0.11 100.0 Y_RNA.14-201 misc RNA Peyer's patch (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 12.00 4.65 0.02 100.0 RNU5E-1-201 snRNA Peyer's patch (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 769.00 24.03 1.53 100.0 SNORA31-201 snoRNA Peyer's patch (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 16.00 1.08 0.03 48.48 RNA5SP389-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 14.00 0.94 0.03 100.0 RNA5SP389-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 1113.70 3.88 2.22 54.62 RNU5A-1-201 snRNA Peyer's patch (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 2628.00 9.15 5.23 67.3 RNU5A-1-201 snRNA Peyer's patch (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 4377.00 15.24 8.72 64.88 RNU5A-1-201 snRNA Peyer's patch (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 2704.00 9.41 5.38 63.77 RNU5A-1-201 snRNA Peyer's patch (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 1050.66 3.66 2.09 66.92 RNU5A-1-201 snRNA Peyer's patch (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 12.00 0.04 0.02 100.0 RNU5A-1-201 snRNA Peyer's patch (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 3936.00 13.70 7.84 70.4 RNU5A-1-201 snRNA Peyer's patch (Tissue)