ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 11.00 61.11 0.07 100.0 MIR183-201 miRNA testis (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 252.00 69.81 1.58 100.0 MIR145-201 miRNA testis (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 42.00 11.63 0.26 100.0 MIR145-201 miRNA testis (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 1192.00 96.75 7.47 98.19 MIR186-201 miRNA testis (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 5.00 100.00 0.03 100.0 MIR200B-201 miRNA testis (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 4.00 30.77 0.03 100.0 MIR218-1-201 miRNA testis (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 2767.00 94.86 17.34 96.92 MIR181B2-201 miRNA testis (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 1229655.00 88.29 7704.86 88.85 MIR10B-201 miRNA testis (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 4.36 48.46 0.03 87.23 MIR130B-201 miRNA testis (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 2.28 25.37 0.01 32.62 MIR130B-201 miRNA testis (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 2.00 22.22 0.01 100.0 MIR130B-201 miRNA testis (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 501.00 26.15 3.14 100.0 MIR199A1-201 miRNA testis (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 4.00 80.00 0.03 100.0 MIR487B-201 miRNA testis (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 88.51 73.76 0.55 75.65 MIR93-201 miRNA testis (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 22.38 18.65 0.14 26.02 MIR93-201 miRNA testis (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 331.00 83.17 2.07 91.94 MIR532-201 miRNA testis (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 45.00 88.24 0.28 100.0 MIR15B-201 miRNA testis (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 45.00 86.54 0.28 100.0 MIR150-201 miRNA testis (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 77.00 59.23 0.48 100.0 MIR542-201 miRNA testis (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 130.00 67.01 0.81 100.0 MIR500A-201 miRNA testis (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 6.00 3.09 0.04 100.0 MIR500A-201 miRNA testis (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 4440.00 73.96 27.82 97.86 MIR30A-201 miRNA testis (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 399.00 6.65 2.50 100.0 MIR30A-201 miRNA testis (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 43.00 0.72 0.27 100.0 MIR30A-201 miRNA testis (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 979.00 16.31 6.13 90.99 MIR30A-201 miRNA testis (Tissue)