ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 1341.25 5.57 8.40 68.64 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 137.00 0.57 0.86 100.0 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 1277.77 5.31 8.01 54.23 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 216.00 0.90 1.35 100.0 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 6050.00 32.96 37.91 100.0 SNORD114-9-201 snoRNA testis (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 10435.00 56.84 65.38 100.0 SNORD114-9-201 snoRNA testis (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 118.00 15.53 0.74 100.0 Y_RNA.234-201 misc RNA testis (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 37.00 3.03 0.23 100.0 RNA5SP141-201 rRNA pseudogene testis (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 628.00 64.68 3.93 100.0 SNORD114-15-201 snoRNA testis (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 380.00 15.16 2.38 100.0 ENST00000364722 snoRNA testis (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 455.00 58.63 2.85 100.0 SNORD113-3-201 snoRNA testis (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 3850.00 81.95 24.12 100.0 SNORD52-201 snoRNA testis (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 9.00 0.63 0.06 100.0 SNORD117-201 snoRNA testis (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 138.00 1.04 0.86 100.0 SNORD114-3-201 snoRNA testis (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 2405.00 18.10 15.07 100.0 SNORD114-3-201 snoRNA testis (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 9293.00 69.92 58.23 100.0 SNORD114-3-201 snoRNA testis (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 1838.00 84.74 11.52 100.0 SNORD113-9-201 snoRNA testis (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 17599.00 76.54 110.27 100.0 SNORD38A-201 snoRNA testis (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 3878.00 16.87 24.30 100.0 SNORD38A-201 snoRNA testis (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 224.00 0.97 1.40 100.0 SNORD38A-201 snoRNA testis (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 51845.00 95.72 324.85 99.01 SNORD114-20-201 snoRNA testis (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 368.00 13.47 2.31 78.63 7SK.1-201 misc RNA testis (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 1.00 0.04 0.01 20.0 7SK.1-201 misc RNA testis (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 40.00 1.46 0.25 100.0 7SK.1-201 misc RNA testis (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 520.00 19.03 3.26 83.87 7SK.1-201 misc RNA testis (Tissue)