ENCFF476SLG

Library Details

Organism: Homo Sapiens
Biosample: A375 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR376XXO
Description: Part of ENCODE experiment ENCSR376XXO. The libraries contained in this experiment come from independent growths of melanoma cell line, A375. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 17.00 11.33 0.14 100.0 MIR425-201 miRNA A375 (Cell line)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 21.00 56.76 0.17 100.0 MIR210-201 miRNA A375 (Cell line)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 1076.00 96.24 8.78 97.73 MIR378A-201 miRNA A375 (Cell line)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 20.00 31.25 0.16 100.0 MIR361-201 miRNA A375 (Cell line)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 2.00 0.61 0.02 11.76 MIR101-2-201 miRNA A375 (Cell line)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 305.00 93.56 2.49 95.31 MIR101-2-201 miRNA A375 (Cell line)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 1880.00 98.22 15.34 98.9 MIR26A1-201 miRNA A375 (Cell line)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 3.00 100.00 0.02 100.0 MIR342-201 miRNA A375 (Cell line)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 25.00 2.57 0.20 100.0 MIR148A-201 miRNA A375 (Cell line)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 890.00 91.47 7.26 94.78 MIR148A-201 miRNA A375 (Cell line)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 6.00 100.00 0.05 100.0 MIR410-201 miRNA A375 (Cell line)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 6.00 85.71 0.05 100.0 MIR409-201 miRNA A375 (Cell line)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 2.00 100.00 0.02 100.0 MIR411-201 miRNA A375 (Cell line)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 249.00 95.40 2.03 97.27 MIR26B-201 miRNA A375 (Cell line)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 189.00 80.43 1.54 91.3 MIR148B-201 miRNA A375 (Cell line)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 529.00 98.33 4.32 99.62 MIRLET7G-201 miRNA A375 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 977.00 95.04 7.97 98.89 MIR30D-201 miRNA A375 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 5.00 0.49 0.04 31.25 MIR30D-201 miRNA A375 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_21_+ 6–21 9.00 0.88 0.07 100.0 MIR30D-201 miRNA A375 (Cell line)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 42.00 97.67 0.34 100.0 MIR126-201 miRNA A375 (Cell line)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 34.00 77.27 0.28 100.0 MIR374A-201 miRNA A375 (Cell line)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 1078.00 88.29 8.80 100.0 MIR31-201 miRNA A375 (Cell line)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 3.00 0.00 0.02 100.0 RNA5S12-201 rRNA A375 (Cell line)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 1701.37 0.95 13.89 52.32 RNA5S12-201 rRNA A375 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 22240.00 12.41 181.52 99.2 RNA5S12-201 rRNA A375 (Cell line)