ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 164.00 21.47 0.54 67.21 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 164.00 93.71 0.54 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 400.00 0.18 1.32 58.74 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 281.00 0.13 0.93 41.26 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 203876.00 91.18 672.07 99.33 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 1295.36 41.14 4.27 78.13 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 188.00 5.97 0.62 76.42 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 419.54 13.32 1.38 26.98 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 48399.00 94.86 159.55 99.07 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 8.00 0.13 0.03 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 1579.00 11.77 5.21 60.66 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 101.00 0.11 0.33 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 626.00 0.86 2.06 93.71 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 1035.00 57.53 3.41 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 759.00 10.46 2.50 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 95702.00 97.41 315.48 99.89 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 39.00 0.25 0.13 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 9197.00 58.94 30.32 91.96 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 45.00 15.10 0.15 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 23.00 2.82 0.08 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 61.00 7.19 0.20 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 22731.00 97.07 74.93 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 629.00 94.44 2.07 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 20963.00 61.27 69.10 97.35 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 91.00 0.27 0.30 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA esophagus squamous epithelium (Tissue)