ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 96.00 2.39 0.32 100.0 ENST00000760093 lncRNA esophagus squamous epithelium (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 3277.00 75.63 10.80 80.91 SNHG14-356 lncRNA esophagus squamous epithelium (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 2142.00 10.29 7.06 82.23 LINC02806-241 lncRNA esophagus squamous epithelium (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 633.00 3.04 2.09 100.0 LINC02806-241 lncRNA esophagus squamous epithelium (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 28.00 0.13 0.09 100.0 LINC02806-241 lncRNA esophagus squamous epithelium (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 12409.00 59.64 40.91 91.82 LINC02806-241 lncRNA esophagus squamous epithelium (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 429.00 80.94 1.41 100.0 EHBP1-AS1-210 lncRNA esophagus squamous epithelium (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 290.00 18.38 0.96 100.0 ENST00000770398 lncRNA esophagus squamous epithelium (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 208.00 13.18 0.69 100.0 ENST00000770398 lncRNA esophagus squamous epithelium (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 162.00 10.27 0.53 100.0 ENST00000770398 lncRNA esophagus squamous epithelium (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 111.00 1.07 0.37 100.0 ENST00000771298 lncRNA esophagus squamous epithelium (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 195.00 1.88 0.64 100.0 ENST00000771298 lncRNA esophagus squamous epithelium (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 6528.00 62.85 21.52 92.86 ENST00000771298 lncRNA esophagus squamous epithelium (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 1287.00 12.39 4.24 100.0 ENST00000771298 lncRNA esophagus squamous epithelium (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 1682.00 67.93 5.54 100.0 ENST00000772672 lncRNA esophagus squamous epithelium (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 22.00 0.89 0.07 100.0 ENST00000772672 lncRNA esophagus squamous epithelium (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 411.00 17.36 1.35 100.0 ENST00000773843 lncRNA esophagus squamous epithelium (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 332.00 0.02 1.09 100.0 SNHG12-223 lncRNA esophagus squamous epithelium (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 629386.00 43.56 2074.75 88.65 SNHG12-223 lncRNA esophagus squamous epithelium (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 811488.00 56.17 2675.05 98.11 SNHG12-223 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 3164.00 0.10 10.43 100.0 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 3112457.00 97.30 10260.12 97.67 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 359.00 0.01 1.18 100.0 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 126.72 0.00 0.42 43.55 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 185.68 0.01 0.61 53.67 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)