ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 121979.00 65.60 402.10 98.24 SNORD83A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 4947.00 84.69 16.31 100.0 SNORD41-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 108.00 4.90 0.36 100.0 MT-TF-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 87.00 3.95 0.29 56.13 MT-TF-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 120.00 5.44 0.40 44.12 MT-TF-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 1740.00 25.20 5.74 100.0 MT-TV-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 203.00 0.27 0.67 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 9703.00 13.10 31.99 84.38 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 867.00 1.17 2.86 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 16498.00 22.28 54.39 92.01 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 2.00 0.00 0.01 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 741.00 1.00 2.44 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 689.00 0.93 2.27 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 695.00 14.91 2.29 89.1 MT-TI-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 1747.00 37.47 5.76 100.0 MT-TI-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 3965.66 13.88 13.07 63.23 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 5380.70 18.83 17.74 54.51 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 71.00 0.25 0.23 100.0 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 13634.00 47.71 44.94 93.13 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 1059.00 19.57 3.49 100.0 MT-TM-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 2109.00 38.98 6.95 88.46 MT-TM-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 148.00 35.41 0.49 100.0 MT-TC-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 12192.00 19.35 40.19 85.2 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 70.00 0.11 0.23 100.0 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 23506.00 37.32 77.49 100.0 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)