ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 754.00 27.57 5.83 100.0 HCN2-201 protein coding GM23338 (Cell line)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 1.00 4.17 0.01 100.0 SLC49A4-201 protein coding GM23338 (Cell line)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 43.00 18.61 0.33 100.0 ATP5MC3-201 protein coding GM23338 (Cell line)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 40449.00 95.51 312.77 100.0 CDC25A-201 protein coding GM23338 (Cell line)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 26.00 14.21 0.20 100.0 RUNX3-201 protein coding GM23338 (Cell line)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 108.00 59.67 0.84 100.0 BLOC1S4-201 protein coding GM23338 (Cell line)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 50.00 14.93 0.39 100.0 ATAD5-201 protein coding GM23338 (Cell line)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 1188.00 45.80 9.19 100.0 SLITRK5-201 protein coding GM23338 (Cell line)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 918.00 61.00 7.10 100.0 HASPIN-201 protein coding GM23338 (Cell line)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 35.00 1.84 0.27 100.0 PRR14L-201 protein coding GM23338 (Cell line)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 4798.00 97.30 37.10 100.0 ATG101-201 protein coding GM23338 (Cell line)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 113.00 22.97 0.87 100.0 PRICKLE1-201 protein coding GM23338 (Cell line)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 45.00 100.00 0.35 100.0 MIR133A2-201 miRNA GM23338 (Cell line)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 1665.00 32.53 12.87 100.0 PBLD-204 protein coding GM23338 (Cell line)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 4357.00 95.40 33.69 99.79 MIRLET7BHG-201 lncRNA GM23338 (Cell line)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 3.00 0.07 0.02 75.0 MIRLET7BHG-201 lncRNA GM23338 (Cell line)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 123.00 80.39 0.95 99.19 MIR375-201 miRNA GM23338 (Cell line)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 3.00 1.96 0.02 100.0 MIR375-201 miRNA GM23338 (Cell line)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 794.00 7.29 6.14 100.0 MIR30E-201 miRNA GM23338 (Cell line)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 9814.00 90.15 75.89 100.0 MIR30E-201 miRNA GM23338 (Cell line)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 58.00 71.60 0.45 100.0 MIR29A-201 miRNA GM23338 (Cell line)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 130.00 83.33 1.01 100.0 MIR345-201 miRNA GM23338 (Cell line)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 12913.00 99.31 99.85 100.0 MIR16-2-201 miRNA GM23338 (Cell line)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 51.00 2.46 0.39 100.0 MIR340-201 miRNA GM23338 (Cell line)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 1965.00 94.88 15.19 100.0 MIR340-201 miRNA GM23338 (Cell line)