ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 128.00 64.65 0.99 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 16.00 3.12 0.12 34.04 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 33.00 70.21 0.26 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 51.00 0.08 0.39 6.49 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 735.00 1.21 5.68 93.51 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 35759.00 59.11 276.50 94.26 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 1353.00 9.69 10.46 52.1 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 3876.38 27.76 29.97 90.82 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 509.71 3.65 3.94 12.98 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 5519.00 67.25 42.68 95.87 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 4.00 0.02 0.03 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 1021.00 4.72 7.89 71.9 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 1440.00 2.60 11.13 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 1731.00 1.36 13.38 82.19 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 2189.00 62.99 16.93 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 1109.00 2.93 8.58 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 47748.00 81.06 369.21 98.47 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 257.00 0.05 1.99 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 415319.00 86.22 3211.41 98.87 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 25.00 6.49 0.19 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 24992.00 90.47 193.25 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 45.00 1.15 0.35 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 4498.00 72.35 34.78 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 261.00 28.31 2.02 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 124285.00 51.13 961.02 86.28 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA GM23338 (Cell line)