ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 861.00 5.74 6.66 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 5.00 0.15 0.04 38.46 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 63.00 1.95 0.49 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 4.00 0.12 0.03 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 802.00 24.78 6.20 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 162.00 0.16 1.25 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 133.00 11.49 1.03 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 131.00 11.13 1.01 92.25 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 101.00 8.58 0.78 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 11.00 0.93 0.09 7.75 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 1283.00 3.36 9.92 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 306.00 0.80 2.37 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 7.00 0.91 0.05 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 2639.00 47.04 20.41 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 4.00 0.33 0.03 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 3413.00 1.40 26.39 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 671.00 0.28 5.19 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 471.00 0.19 3.64 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 1132.00 0.46 8.75 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 285.00 0.12 2.20 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 26451.00 10.86 204.53 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 121.00 0.12 0.94 57.89 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 259.00 0.26 2.00 63.79 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 4433.00 4.42 34.28 98.69 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 121926.00 43.82 942.78 89.3 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA GM23338 (Cell line)