ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 8853.00 8.41 68.45 55.72 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 19.00 0.55 0.15 11.45 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 147.00 4.29 1.14 93.63 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 97.00 1.26 0.75 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 4712.00 3.73 36.44 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 48109.00 38.11 372.00 91.59 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 289.00 2.26 2.23 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 347.00 5.95 2.68 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 416.00 0.17 3.22 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 5703.00 12.48 44.10 77.49 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 224.00 0.49 1.73 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 61.00 0.13 0.47 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 326.00 0.71 2.52 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 3653.00 8.00 28.25 46.97 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 536.00 1.17 4.14 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 3945.00 18.20 30.50 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 2532.00 11.68 19.58 71.26 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 2735.00 14.02 21.15 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 328.00 0.57 2.54 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 71.00 0.12 0.55 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 653.00 1.14 5.05 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 41536.00 72.41 321.17 95.14 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 1957.00 3.41 15.13 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 2294.00 12.89 17.74 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 21414.00 59.36 165.58 86.19 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA GM23338 (Cell line)