ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 79.65 0.50 0.62 4.25 ENST00000823279 lncRNA GM23338 (Cell line)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 129.62 0.81 1.00 41.54 ENST00000823279 lncRNA GM23338 (Cell line)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 251.00 1.57 1.94 84.8 ENST00000823279 lncRNA GM23338 (Cell line)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 439.84 2.76 3.40 24.99 ENST00000823279 lncRNA GM23338 (Cell line)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 1563.62 9.81 12.09 74.0 ENST00000823801 lncRNA GM23338 (Cell line)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 1.00 50.00 0.01 100.0 ENST00000827714 lncRNA GM23338 (Cell line)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 40011.00 51.94 309.38 100.0 GAS5-377 lncRNA GM23338 (Cell line)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 25.00 0.03 0.19 100.0 GAS5-377 lncRNA GM23338 (Cell line)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 101.00 0.13 0.78 100.0 GAS5-377 lncRNA GM23338 (Cell line)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 33680.00 43.72 260.43 100.0 GAS5-377 lncRNA GM23338 (Cell line)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 331.00 90.19 2.56 100.0 MIR205HG-245 lncRNA GM23338 (Cell line)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 55416.00 74.12 428.50 100.0 TAF12-DT-204 lncRNA GM23338 (Cell line)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 33421.00 78.42 258.42 99.93 ZFAS1-238 lncRNA GM23338 (Cell line)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 24.00 0.06 0.19 100.0 ZFAS1-238 lncRNA GM23338 (Cell line)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 34.00 0.08 0.26 100.0 ZFAS1-238 lncRNA GM23338 (Cell line)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 373.00 0.88 2.88 100.0 ZFAS1-238 lncRNA GM23338 (Cell line)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 193.00 2.49 1.49 100.0 ZFAS1-242 lncRNA GM23338 (Cell line)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 7061.00 90.92 54.60 100.0 ZFAS1-242 lncRNA GM23338 (Cell line)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 1509.00 33.44 11.67 100.0 ENST00000837997 lncRNA GM23338 (Cell line)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 1732.00 38.39 13.39 100.0 ENST00000837997 lncRNA GM23338 (Cell line)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 706.00 72.86 5.46 84.15 ENST00000839036 lncRNA GM23338 (Cell line)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 36725.00 72.31 283.97 100.0 ENST00000849527 lncRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 1434.00 9.61 11.09 87.71 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 3328.00 22.31 25.73 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 235.00 0.40 1.82 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA GM23338 (Cell line)