ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 679.00 0.27 5.25 100.0 MIR17HG-214 lncRNA GM23338 (Cell line)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 130361.33 51.89 1008.00 56.31 MIR17HG-214 lncRNA GM23338 (Cell line)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 2065.00 0.82 15.97 100.0 MIR17HG-214 lncRNA GM23338 (Cell line)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 2986.00 1.19 23.09 100.0 MIR17HG-214 lncRNA GM23338 (Cell line)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 1445.00 0.58 11.17 100.0 MIR17HG-214 lncRNA GM23338 (Cell line)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 2449.00 0.97 18.94 100.0 MIR17HG-214 lncRNA GM23338 (Cell line)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 6685.00 12.51 51.69 100.0 SNHG32-223 lncRNA GM23338 (Cell line)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 42.00 0.08 0.32 100.0 SNHG32-223 lncRNA GM23338 (Cell line)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 33.00 0.06 0.26 100.0 SNHG32-223 lncRNA GM23338 (Cell line)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 545.00 1.02 4.21 94.95 SNHG32-223 lncRNA GM23338 (Cell line)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 45251.00 84.67 349.90 100.0 SNHG32-223 lncRNA GM23338 (Cell line)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 3333.00 80.72 25.77 96.66 SNHG32-227 lncRNA GM23338 (Cell line)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 396.00 9.59 3.06 100.0 SNHG32-227 lncRNA GM23338 (Cell line)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 10.00 0.24 0.08 100.0 SNHG32-227 lncRNA GM23338 (Cell line)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 3.00 0.07 0.02 100.0 SNHG32-227 lncRNA GM23338 (Cell line)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 9013.00 82.82 69.69 100.0 B4GALT1-203 nonsense mediated decay GM23338 (Cell line)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 37.00 0.14 0.29 100.0 ENST00000722183 lncRNA GM23338 (Cell line)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 4349.00 16.47 33.63 90.28 ENST00000722183 lncRNA GM23338 (Cell line)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 3771.00 14.28 29.16 100.0 ENST00000722183 lncRNA GM23338 (Cell line)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 325.00 84.86 2.51 100.0 MIR34BHG-202 lncRNA GM23338 (Cell line)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 18378.00 68.32 142.11 73.78 THBS3-AS1-228 lncRNA GM23338 (Cell line)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 613.00 44.81 4.74 100.0 MIR200CHG-202 lncRNA GM23338 (Cell line)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 177.00 12.94 1.37 100.0 MIR200CHG-202 lncRNA GM23338 (Cell line)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 28.00 1.36 0.22 100.0 SNHG16-266 lncRNA GM23338 (Cell line)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 667.00 32.39 5.16 100.0 SNHG16-266 lncRNA GM23338 (Cell line)