ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 7149.00 22.57 55.28 100.0 LINC02739-203 lncRNA GM23338 (Cell line)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 155.00 54.77 1.20 100.0 MIR124-1HG-216 lncRNA GM23338 (Cell line)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 29.00 9.80 0.22 100.0 SNHG10-212 lncRNA GM23338 (Cell line)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 8194.62 79.76 63.36 94.68 SNHG19-202 lncRNA GM23338 (Cell line)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 468.54 4.56 3.62 12.75 SNHG19-202 lncRNA GM23338 (Cell line)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 4229.00 36.98 32.70 100.0 MIR222HG-206 lncRNA GM23338 (Cell line)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 5037.00 44.04 38.95 90.09 MIR222HG-206 lncRNA GM23338 (Cell line)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 513.00 4.49 3.97 100.0 MIR222HG-206 lncRNA GM23338 (Cell line)
ENST00000688371.3 ENST00000688371.3_458_485_+ 458–485 98415.00 28.85 760.98 100.0 MIR302CHG-205 lncRNA GM23338 (Cell line)
ENST00000688371.3 ENST00000688371.3_313_335_+ 313–335 2550.00 0.75 19.72 18.51 MIR302CHG-205 lncRNA GM23338 (Cell line)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 16936.84 4.97 130.96 84.93 MIR302CHG-205 lncRNA GM23338 (Cell line)
ENST00000688371.3 ENST00000688371.3_313_333_+ 313–333 11223.00 3.29 86.78 88.81 MIR302CHG-205 lncRNA GM23338 (Cell line)
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 3326.72 0.98 25.72 20.46 MIR302CHG-205 lncRNA GM23338 (Cell line)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 51510.00 15.10 398.30 100.0 MIR302CHG-205 lncRNA GM23338 (Cell line)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 29556.00 8.66 228.54 96.24 MIR302CHG-205 lncRNA GM23338 (Cell line)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 38421.00 11.26 297.09 90.01 MIR302CHG-205 lncRNA GM23338 (Cell line)
ENST00000688371.3 ENST00000688371.3_458_490_+ 458–490 8314.00 2.44 64.29 100.0 MIR302CHG-205 lncRNA GM23338 (Cell line)
ENST00000688371.3 ENST00000688371.3_458_481_+ 458–481 27272.00 7.99 210.88 66.96 MIR302CHG-205 lncRNA GM23338 (Cell line)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 8.00 88.89 0.06 100.0 MIR99AHG-370 lncRNA GM23338 (Cell line)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 3420.00 96.28 26.44 100.0 HPS4-237 retained intron GM23338 (Cell line)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 430.00 12.77 3.32 100.0 DNAJC5-203 nonsense mediated decay GM23338 (Cell line)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 1661.00 15.68 12.84 100.0 ENST00000707189 TEC GM23338 (Cell line)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 364.00 0.14 2.81 100.0 MIR17HG-214 lncRNA GM23338 (Cell line)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 96103.45 38.25 743.11 45.83 MIR17HG-214 lncRNA GM23338 (Cell line)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 425.00 0.17 3.29 100.0 MIR17HG-214 lncRNA GM23338 (Cell line)