ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 38355.94 1.97 296.58 58.06 U2.3-201 snRNA GM23338 (Cell line)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 35138.52 1.80 271.70 48.17 U2.3-201 snRNA GM23338 (Cell line)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 96.00 0.00 0.74 100.0 U2.6-201 snRNA GM23338 (Cell line)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 43.00 27.56 0.33 100.0 ENST00000619323 lncRNA GM23338 (Cell line)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 158.00 32.58 1.22 100.0 SCARNA4-202 scaRNA GM23338 (Cell line)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 4.00 4.94 0.03 100.0 ENST00000625572 miRNA GM23338 (Cell line)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 75.00 14.94 0.58 100.0 ENST00000628177 snoRNA GM23338 (Cell line)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 19376.00 89.46 149.82 100.0 ENST00000630615 snoRNA GM23338 (Cell line)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 611.00 36.65 4.72 100.0 DMRT2-209 protein coding GM23338 (Cell line)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 125.00 7.50 0.97 100.0 DMRT2-209 protein coding GM23338 (Cell line)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 294.00 31.44 2.27 100.0 SNORD98-201 snoRNA GM23338 (Cell line)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 288.00 30.80 2.23 100.0 SNORD98-201 snoRNA GM23338 (Cell line)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 123091.92 52.15 951.79 55.8 MIR106AHG-201 lncRNA GM23338 (Cell line)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 1418.55 0.60 10.97 69.91 MIR106AHG-201 lncRNA GM23338 (Cell line)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 754.00 0.32 5.83 100.0 MIR106AHG-201 lncRNA GM23338 (Cell line)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 626.22 0.27 4.84 30.86 MIR106AHG-201 lncRNA GM23338 (Cell line)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 11924.00 49.76 92.20 99.59 SNHG14-224 lncRNA GM23338 (Cell line)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 2771.00 11.56 21.43 98.89 SNHG14-224 lncRNA GM23338 (Cell line)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 470.00 1.96 3.63 100.0 SNHG14-224 lncRNA GM23338 (Cell line)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 1644.00 6.86 12.71 98.62 SNHG14-224 lncRNA GM23338 (Cell line)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 65.00 0.27 0.50 100.0 SNHG14-224 lncRNA GM23338 (Cell line)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 67.00 0.28 0.52 7.37 SNHG14-224 lncRNA GM23338 (Cell line)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 593.00 2.47 4.59 69.85 SNHG14-224 lncRNA GM23338 (Cell line)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 647.00 2.70 5.00 58.55 SNHG14-224 lncRNA GM23338 (Cell line)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 13255.85 71.10 102.50 86.66 5S_rRNA.20-201 rRNA pseudogene GM23338 (Cell line)