ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 2168.00 44.70 16.76 94.26 MIR486-1-201 miRNA GM23338 (Cell line)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 243.00 3.90 1.88 21.35 NOP56-219 retained intron GM23338 (Cell line)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 184.00 2.95 1.42 100.0 NOP56-219 retained intron GM23338 (Cell line)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 571.00 9.17 4.42 100.0 NOP56-219 retained intron GM23338 (Cell line)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 2566.00 41.21 19.84 99.23 NOP56-219 retained intron GM23338 (Cell line)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 90.00 0.38 0.70 70.87 RNA5-8SN2-201 rRNA GM23338 (Cell line)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 19.70 0.08 0.15 57.94 RNA5-8SN2-201 rRNA GM23338 (Cell line)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 24.00 0.10 0.19 100.0 RNA5-8SN2-201 rRNA GM23338 (Cell line)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 1748.00 7.37 13.52 100.0 RNA5-8SN2-201 rRNA GM23338 (Cell line)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 108.00 0.46 0.84 100.0 RNA5-8SN2-201 rRNA GM23338 (Cell line)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 49.00 0.21 0.38 35.25 RNA5-8SN2-201 rRNA GM23338 (Cell line)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 12.88 0.05 0.10 37.89 RNA5-8SN2-201 rRNA GM23338 (Cell line)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 256.00 95.17 1.98 100.0 MIR7974-201 miRNA GM23338 (Cell line)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 1179.00 0.06 9.12 100.0 U2.3-201 snRNA GM23338 (Cell line)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 1866.66 0.10 14.43 29.13 U2.3-201 snRNA GM23338 (Cell line)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 114554.00 5.88 885.78 91.5 U2.3-201 snRNA GM23338 (Cell line)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 8.00 0.00 0.06 100.0 U2.3-201 snRNA GM23338 (Cell line)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 55861.00 2.87 431.94 76.97 U2.3-201 snRNA GM23338 (Cell line)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 1069898.00 54.95 8272.87 95.11 U2.3-201 snRNA GM23338 (Cell line)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 66145.00 3.40 511.46 95.79 U2.3-201 snRNA GM23338 (Cell line)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 4512.90 0.23 34.90 70.42 U2.3-201 snRNA GM23338 (Cell line)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 322.00 0.02 2.49 100.0 U2.3-201 snRNA GM23338 (Cell line)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 272.00 0.01 2.10 100.0 U2.3-201 snRNA GM23338 (Cell line)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 381932.00 19.62 2953.25 100.0 U2.3-201 snRNA GM23338 (Cell line)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 1594.00 0.08 12.33 100.0 U2.3-201 snRNA GM23338 (Cell line)