ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 980.00 77.78 7.58 100.0 KRTAP19-1-201 protein coding GM23338 (Cell line)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 47.00 24.87 0.36 100.0 MIR708-201 miRNA GM23338 (Cell line)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 20.00 90.91 0.15 100.0 MIR509-3-201 miRNA GM23338 (Cell line)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 828.00 96.39 6.40 100.0 MIR301B-201 miRNA GM23338 (Cell line)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 402.00 45.12 3.11 83.06 RNU1-82P-201 snRNA GM23338 (Cell line)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 87.00 14.90 0.67 100.0 SNORD66-201 snoRNA GM23338 (Cell line)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 100.00 17.12 0.77 62.11 SNORD66-201 snoRNA GM23338 (Cell line)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 23.00 3.94 0.18 100.0 SNORD66-201 snoRNA GM23338 (Cell line)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 7.00 1.20 0.05 100.0 SNORD66-201 snoRNA GM23338 (Cell line)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 144.00 30.25 1.11 100.0 U3.17-201 snoRNA GM23338 (Cell line)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 722.00 81.03 5.58 100.0 SNORD17-201 snoRNA GM23338 (Cell line)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 225.00 5.79 1.74 100.0 SNORD72-201 snoRNA GM23338 (Cell line)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 66.00 30.56 0.51 100.0 SNORD70B-201 snoRNA GM23338 (Cell line)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 577.00 42.58 4.46 92.03 RNY4P18-201 misc RNA GM23338 (Cell line)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 70.00 4.32 0.54 100.0 SNORD90-201 snoRNA GM23338 (Cell line)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 104.00 6.42 0.80 82.54 SNORD90-201 snoRNA GM23338 (Cell line)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 3152.00 52.50 24.37 100.0 SNORD69-201 snoRNA GM23338 (Cell line)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 82.00 1.37 0.63 100.0 SNORD69-201 snoRNA GM23338 (Cell line)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1197.00 19.94 9.26 100.0 SNORD69-201 snoRNA GM23338 (Cell line)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 126.00 2.10 0.97 100.0 SNORD69-201 snoRNA GM23338 (Cell line)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 99.00 22.50 0.77 91.67 SNORD70-201 snoRNA GM23338 (Cell line)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 2260.00 2.75 17.48 100.0 B4GALNT2-202 protein coding GM23338 (Cell line)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 69176.00 84.29 534.90 91.07 B4GALNT2-202 protein coding GM23338 (Cell line)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 466.00 88.59 3.60 100.0 NDE1-202 protein coding GM23338 (Cell line)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 6.00 35.29 0.05 100.0 MIR450B-201 miRNA GM23338 (Cell line)