ENCFF429ILE

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR379GPS
Description: Part of ENCODE experiment ENCSR379GPS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 26.00 86.67 0.13 86.67 MIR381-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 2740.00 84.39 13.62 93.64 MIR103A2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362155.4 ENST00000362155.4_9_29_+ 9–29 6.00 85.71 0.03 100.0 MIR369-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 169.00 39.49 0.84 100.0 MIR425-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 102.00 23.83 0.51 100.0 MIR425-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 120.00 57.97 0.60 100.0 MIR210-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 29071.00 97.00 144.55 97.99 MIR378A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 232.00 52.85 1.15 100.0 MIR361-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 3426.00 85.03 17.03 93.91 MIR101-2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 237.00 5.88 1.18 51.63 MIR101-2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 65941.00 97.78 327.87 99.02 MIR26A1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 1.00 100.00 0.00 100.0 MIR129-2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 670.00 65.18 3.33 100.0 MIR342-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 31023.00 92.38 154.25 93.98 MIR148A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 196.00 0.58 0.97 100.0 MIR148A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 16.00 100.00 0.08 100.0 MIR410-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 202.00 84.17 1.00 100.0 MIR409-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362237.3 ENST00000362237.3_15_37_+ 15–37 3.00 1.25 0.01 100.0 MIR409-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 207.00 98.57 1.03 100.0 MIR411-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 3858.00 92.63 19.18 95.12 MIR26B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 452.00 76.87 2.25 81.15 MIR148B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 5011.00 95.28 24.92 98.24 MIRLET7G-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362283.1 ENST00000362283.1_6_21_+ 6–21 348.00 2.43 1.73 100.0 MIR30D-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 8925.00 62.21 44.38 93.78 MIR30D-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 4300.00 29.97 21.38 87.9 MIR30D-201 miRNA esophagus squamous epithelium (Tissue)