ENCFF429ILE

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR379GPS
Description: Part of ENCODE experiment ENCSR379GPS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 4410.00 32.31 21.93 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 228.00 1.67 1.13 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 5506.00 40.33 27.38 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 16.00 0.12 0.08 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 997.00 20.24 4.96 89.98 MT-TS2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 710.00 14.41 3.53 100.0 MT-TS2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 462.00 9.38 2.30 100.0 MT-TS2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 206.00 11.06 1.02 100.0 MT-TL2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 238.00 0.03 1.18 100.0 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 735940.00 88.53 3659.25 92.34 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 683.00 0.08 3.40 82.39 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 37.00 0.00 0.18 100.0 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 738.00 0.09 3.67 87.75 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 103.00 0.01 0.51 15.01 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 977.00 0.12 4.86 100.0 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 2.00 100.00 0.01 100.0 MIR196A1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 5584.00 62.76 27.76 100.0 MT-RNR1-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 77.00 62.10 0.38 100.0 MIR454-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 136.00 65.38 0.68 100.0 MIR501-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 739.00 89.04 3.67 100.0 MIR769-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 991.00 74.34 4.93 100.0 KRTAP19-1-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 32.00 20.25 0.16 100.0 MIR708-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 6.00 100.00 0.03 100.0 MIR509-3-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 13.00 100.00 0.06 100.0 MIR301B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 548.00 38.76 2.72 72.78 RNU1-82P-201 snRNA esophagus squamous epithelium (Tissue)