ENCFF000JJB

Library Details

Organism: Homo Sapiens
Biosample: hair follicle dermal papilla cell (Primary cell)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000CVC
Description: Part of ENCODE experiment ENCSR000CVC. The libraries contained in this experiment come from hair follicle dermal papilla primary whole cells, HFDPC isolated from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 111.00 9.64 5.90 100.0 WDR74-204 protein coding hair follicle dermal papilla cell (Primary cell)
ENST00000527983.5 ENST00000527983.5_1314_1406_+ 1314–1406 735.00 32.39 39.05 70.13 HSPA8-211 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000531908.5 ENST00000531908.5_147_241_+ 147–241 2836.00 77.66 150.67 100.0 RPS13-208 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 6187.00 78.70 328.71 100.0 HSPA8-215 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000567229.5 ENST00000567229.5_479_567_+ 479–567 1148.00 67.69 60.99 100.0 RPL4-214 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000570843.1 ENST00000570843.1_1_85_+ 1–85 4301.00 30.96 228.51 100.0 ENST00000570843 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000570843.1 ENST00000570843.1_1_80_+ 1–80 5748.00 41.38 305.38 100.0 ENST00000570843 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 12.00 0.40 0.64 100.0 SNORD3C-201 snoRNA hair follicle dermal papilla cell (Primary cell)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 0.86 0.01 0.05 86.48 C19orf48P-203 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 1711.00 27.75 90.90 100.0 C19orf48P-203 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 284.00 25.45 15.09 100.0 RPS11-206 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 18.00 1.28 0.96 100.0 ENST00000602478 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000612233.1 ENST00000612233.1_681_767_+ 681–767 600.00 44.68 31.88 100.0 NOP56-219 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 119.75 0.83 6.36 42.31 U2.3-201 snRNA hair follicle dermal papilla cell (Primary cell)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 5.00 0.03 0.27 100.0 U2.3-201 snRNA hair follicle dermal papilla cell (Primary cell)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 5024.00 34.87 266.92 100.0 U2.3-201 snRNA hair follicle dermal papilla cell (Primary cell)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 143.38 1.00 7.62 50.66 U2.3-201 snRNA hair follicle dermal papilla cell (Primary cell)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 5.22 0.04 0.28 86.92 U2.3-201 snRNA hair follicle dermal papilla cell (Primary cell)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 4.66 0.03 0.25 42.34 U2.3-201 snRNA hair follicle dermal papilla cell (Primary cell)
ENST00000640631.2 ENST00000640631.2_4119_4213_+ 4119–4213 14.00 3.47 0.74 100.0 SNHG14-224 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000650796.1 ENST00000650796.1_1641_1732_+ 1641–1732 525.00 0.10 27.89 100.0 GAS5-230 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000650796.1 ENST00000650796.1_358_438_+ 358–438 322436.00 58.97 17130.56 95.77 GAS5-230 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000650796.1 ENST00000650796.1_2165_2249_+ 2165–2249 2457.00 0.45 130.54 100.0 GAS5-230 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000650796.1 ENST00000650796.1_1641_1722_+ 1641–1722 86459.00 15.81 4593.44 76.24 GAS5-230 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 18.00 1.09 0.96 100.0 ENST00000651540 lncRNA hair follicle dermal papilla cell (Primary cell)