ENCFF316MTC

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 245.00 3.65 1.57 100.0 SNORD6-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 1783.00 26.54 11.45 100.0 SNORD6-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 481.00 1.59 3.09 100.0 SNORD82-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 26.00 0.09 0.17 89.66 SNORD82-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 7803.00 25.84 50.09 100.0 SNORD82-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 2627.00 8.70 16.86 100.0 SNORD82-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 1786.00 5.91 11.47 77.58 SNORD82-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 8358.08 27.68 53.66 56.63 SNORD82-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 6547.72 21.68 42.03 44.37 SNORD82-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 4905.00 96.06 31.49 98.93 MIR146B-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 29.00 14.01 0.19 100.0 SNHG20-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 1115.00 11.72 7.16 100.0 ATP5MK-205 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 2644.00 27.80 16.97 100.0 ATP5MK-205 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 2379.00 34.89 15.27 100.0 LINC01556-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 38.00 34.55 0.24 100.0 ATAD3A-202 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 4983.00 65.97 31.99 80.14 TMC5-202 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 12059.00 96.90 77.42 100.0 ZMYM2-203 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 112.00 2.08 0.72 100.0 RNVU1-7-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 15.00 0.95 0.10 100.0 SNORD24-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 6941.00 91.97 44.56 100.0 Y_RNA.389-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 58.00 0.87 0.37 90.62 SNORD101-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 191.00 2.85 1.23 96.46 SNORD101-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 1284.00 19.18 8.24 100.0 SNORD101-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 1865.00 27.86 11.97 100.0 SNORD101-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 942.00 35.16 6.05 100.0 SNORD37-201 snoRNA trophoblast cell (In vitro differentiated cells)