ENCFF316MTC

Library Details

Organism:	Homo Sapiens
Biosample:	trophoblast cell (In vitro differentiated cells)
GEO DB ID:	Not available
ENCODE Experiment ID:	ENCSR083HYC

Description:	Part of ENCODE experiment ENCSR083HYC.
Author:	Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID	sncRNA Name	sncRNA position in precursor	Expression	Expression Fraction	Expression (CPM)	Prominence	Transcript Name	Transcript Type	Biosample
TRNA-TRANSCRIPT-CHR17-8119752	tRNA-transcript-chr17-8119752_8_53_+	8–53	553.00	0.99	3.55	100.0	TRNA-TRANSCRIPT-CHR17-8119752	Gln tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752	tRNA-transcript-chr17-8119752_21_72_+	21–72	63.00	0.11	0.40	100.0	TRNA-TRANSCRIPT-CHR17-8119752	Gln tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752	tRNA-transcript-chr17-8119752_17_54_+	17–54	1652.00	2.95	10.61	100.0	TRNA-TRANSCRIPT-CHR17-8119752	Gln tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752	tRNA-transcript-chr17-8119752_1_34_+	1–34	4408.00	7.87	28.30	100.0	TRNA-TRANSCRIPT-CHR17-8119752	Gln tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752	tRNA-transcript-chr17-8119752_1_49_+	1–49	20.00	0.04	0.13	100.0	TRNA-TRANSCRIPT-CHR17-8119752	Gln tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752	tRNA-transcript-chr17-8119752_34_53_+	34–53	9850.00	17.59	63.23	100.0	TRNA-TRANSCRIPT-CHR17-8119752	Gln tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8125746	tRNA-transcript-chr17-8125746_10_32_+	10–32	83.00	0.08	0.53	68.6	TRNA-TRANSCRIPT-CHR17-8125746	Gly tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8125746	tRNA-transcript-chr17-8125746_13_32_+	13–32	211.00	0.20	1.35	64.33	TRNA-TRANSCRIPT-CHR17-8125746	Gly tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8125746	tRNA-transcript-chr17-8125746_1_52_+	1–52	6692.00	6.32	42.96	98.83	TRNA-TRANSCRIPT-CHR17-8125746	Gly tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8222238	tRNA-transcript-chr17-8222238_1_33_+	1–33	2413.00	11.49	15.49	92.45	TRNA-TRANSCRIPT-CHR17-8222238	Asp tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-7930279	tRNA-transcript-chr1-7930279_1_33_+	1–33	3.00	2.73	0.02	100.0	TRNA-TRANSCRIPT-CHR1-7930279	Pseudo tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR19-45478602	tRNA-transcript-chr19-45478602_1_37_+	1–37	35.00	12.82	0.22	36.84	TRNA-TRANSCRIPT-CHR19-45478602	SeC(e) tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR20-45322361	tRNA-transcript-chr20-45322361_1_33_+	1–33	99.00	60.37	0.64	100.0	TRNA-TRANSCRIPT-CHR20-45322361	Pseudo tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR21-17454789	tRNA-transcript-chr21-17454789_1_32_+	1–32	27159.00	37.47	174.35	54.51	TRNA-TRANSCRIPT-CHR21-17454789	Gly tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR21-17454789	tRNA-transcript-chr21-17454789_1_52_+	1–52	1535.00	2.12	9.85	95.05	TRNA-TRANSCRIPT-CHR21-17454789	Gly tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR21-17454789	tRNA-transcript-chr21-17454789_3_52_+	3–52	80.00	0.11	0.51	4.95	TRNA-TRANSCRIPT-CHR21-17454789	Gly tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-130337128	tRNA-transcript-chr2-130337128_1_33_+	1–33	1802.24	42.62	11.57	93.0	TRNA-TRANSCRIPT-CHR2-130337128	Glu tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-130337128	tRNA-transcript-chr2-130337128_1_28_+	1–28	99.00	2.34	0.64	19.37	TRNA-TRANSCRIPT-CHR2-130337128	Glu tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-130337128	tRNA-transcript-chr2-130337128_1_35_+	1–35	129.73	3.07	0.83	6.86	TRNA-TRANSCRIPT-CHR2-130337128	Glu tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-203364408	tRNA-transcript-chr2-203364408_2_32_+	2–32	8220.00	61.95	52.77	91.21	TRNA-TRANSCRIPT-CHR2-203364408	Pseudo tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR3-104160680	tRNA-transcript-chr3-104160680_12_33_+	12–33	2.00	0.02	0.01	100.0	TRNA-TRANSCRIPT-CHR3-104160680	Pseudo tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR5-181188854	tRNA-transcript-chr5-181188854_1_32_+	1–32	4035.00	18.27	25.90	92.55	TRNA-TRANSCRIPT-CHR5-181188854	Pro tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR5-181218270	tRNA-transcript-chr5-181218270_1_39_+	1–39	1281.00	1.46	8.22	100.0	TRNA-TRANSCRIPT-CHR5-181218270	Val tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-125780247	tRNA-transcript-chr6-125780247_1_42_+	1–42	1419.00	1.13	9.11	86.1	TRNA-TRANSCRIPT-CHR6-125780247	Glu tRNA	trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-26311196	tRNA-transcript-chr6-26311196_1_53_+	1–53	151.00	1.06	0.97	100.0	TRNA-TRANSCRIPT-CHR6-26311196	Gln tRNA	trophoblast cell (In vitro differentiated cells)