ENCFF316MTC

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 886.00 8.81 5.69 100.0 ZFAS1-238 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 1963.00 33.99 12.60 100.0 ZFAS1-242 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 95.00 1.65 0.61 100.0 ZFAS1-242 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 96.00 36.64 0.62 100.0 ENST00000837997 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 55.00 20.99 0.35 100.0 ENST00000837997 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 12910.00 65.56 82.88 79.07 ENST00000839036 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 224.00 11.76 1.44 100.0 ENST00000849527 lncRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 12068.00 20.06 77.47 93.45 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 13479.00 22.41 86.53 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 984.00 0.54 6.32 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 2690.00 51.92 17.27 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 17.00 0.33 0.11 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 300.00 9.48 1.93 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 651.00 2.43 4.18 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 78.00 0.93 0.50 27.56 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 1513.00 0.83 9.71 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 2.00 1.20 0.01 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 1676.00 7.98 10.76 98.41 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 3568.00 16.99 22.91 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 13.00 0.06 0.08 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 2496.00 32.46 16.02 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 982.00 0.78 6.30 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 27771.00 22.18 178.28 90.13 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 801.00 0.64 5.14 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 4273.00 3.41 27.43 71.92 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA trophoblast cell (In vitro differentiated cells)