ENCFF310THB

Library Details

Organism: Homo Sapiens
Biosample: vagina (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR812JEU
Description: Part of ENCODE experiment ENCSR812JEU. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's vagina tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 157.00 0.55 0.65 100.0 RNA5SP202-201 rRNA pseudogene vagina (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 148.00 0.52 0.61 100.0 RNA5SP202-201 rRNA pseudogene vagina (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 51.00 0.18 0.21 100.0 RNA5SP202-201 rRNA pseudogene vagina (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 913.36 3.21 3.78 68.52 RNA5SP202-201 rRNA pseudogene vagina (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 76.00 0.27 0.31 100.0 RNA5SP202-201 rRNA pseudogene vagina (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 822.35 2.89 3.40 52.88 RNA5SP202-201 rRNA pseudogene vagina (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 1109.00 3.90 4.59 100.0 RNA5SP202-201 rRNA pseudogene vagina (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 1285.14 4.51 5.31 39.79 RNA5SP202-201 rRNA pseudogene vagina (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 48.00 0.17 0.20 100.0 RNA5SP202-201 rRNA pseudogene vagina (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 3331.00 39.00 13.77 100.0 SNORD114-9-201 snoRNA vagina (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 3993.00 46.75 16.51 100.0 SNORD114-9-201 snoRNA vagina (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 1335.00 12.25 5.52 100.0 Y_RNA.234-201 misc RNA vagina (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 170.00 15.06 0.70 100.0 RNA5SP141-201 rRNA pseudogene vagina (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 376.00 65.62 1.55 100.0 SNORD114-15-201 snoRNA vagina (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 42.00 21.43 0.17 100.0 ENST00000364722 snoRNA vagina (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 289.00 43.07 1.20 100.0 SNORD113-3-201 snoRNA vagina (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 2216.00 74.86 9.16 100.0 SNORD52-201 snoRNA vagina (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 2.00 0.27 0.01 100.0 SNORD117-201 snoRNA vagina (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 1507.00 10.79 6.23 100.0 SNORD114-3-201 snoRNA vagina (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 11385.00 81.55 47.08 99.97 SNORD114-3-201 snoRNA vagina (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 95.00 0.68 0.39 100.0 SNORD114-3-201 snoRNA vagina (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 51.00 10.45 0.21 100.0 RNA5SP298-201 rRNA pseudogene vagina (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 1400.00 78.83 5.79 100.0 SNORD113-9-201 snoRNA vagina (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 480.00 1.42 1.98 100.0 SNORD38A-201 snoRNA vagina (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 28429.00 83.85 117.56 100.0 SNORD38A-201 snoRNA vagina (Tissue)