ENCFF310THB

Library Details

Organism: Homo Sapiens
Biosample: vagina (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR812JEU
Description: Part of ENCODE experiment ENCSR812JEU. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's vagina tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 22082.72 54.97 91.32 68.07 ENST00000756336 lncRNA vagina (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 50.48 0.13 0.21 32.99 ENST00000756336 lncRNA vagina (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 1027.83 2.56 4.25 64.85 ENST00000756336 lncRNA vagina (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 180.57 0.45 0.75 84.38 ENST00000756336 lncRNA vagina (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 4.00 0.74 0.02 100.0 ENST00000756452 lncRNA vagina (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 3624.00 54.63 14.99 100.0 ENST00000760093 lncRNA vagina (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 1100.00 16.58 4.55 100.0 ENST00000760093 lncRNA vagina (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 7198.00 7.20 29.77 76.15 LINC02806-241 lncRNA vagina (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 7.00 0.01 0.03 100.0 LINC02806-241 lncRNA vagina (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 83988.00 84.02 347.32 92.3 LINC02806-241 lncRNA vagina (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 147.00 94.84 0.61 100.0 EHBP1-AS1-210 lncRNA vagina (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 358.00 12.16 1.48 100.0 ENST00000770398 lncRNA vagina (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 31.00 1.05 0.13 100.0 ENST00000770398 lncRNA vagina (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 1314.00 44.63 5.43 100.0 ENST00000770398 lncRNA vagina (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 111.00 0.21 0.46 100.0 ENST00000771298 lncRNA vagina (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 291.00 0.56 1.20 100.0 ENST00000771298 lncRNA vagina (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 47820.00 92.00 197.75 96.87 ENST00000771298 lncRNA vagina (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 407.00 0.78 1.68 100.0 ENST00000771298 lncRNA vagina (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 16.00 4.12 0.07 100.0 ENST00000772672 lncRNA vagina (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 139.00 9.44 0.57 100.0 ENST00000773843 lncRNA vagina (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 100475.00 25.85 415.50 83.07 SNHG12-223 lncRNA vagina (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 287573.00 73.97 1189.22 99.21 SNHG12-223 lncRNA vagina (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 19854.00 45.40 82.10 100.0 SNHG25-206 lncRNA vagina (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 131.00 0.30 0.54 59.55 SNHG25-206 lncRNA vagina (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 714.00 1.63 2.95 100.0 SNHG25-206 lncRNA vagina (Tissue)