ENCFF310THB

Library Details

Organism: Homo Sapiens
Biosample: vagina (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR812JEU
Description: Part of ENCODE experiment ENCSR812JEU. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's vagina tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 5765.00 60.85 23.84 89.66 MIR30D-201 miRNA vagina (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 2329.00 24.58 9.63 77.79 MIR30D-201 miRNA vagina (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 3535.00 65.71 14.62 100.0 MIR126-201 miRNA vagina (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 1673.00 31.10 6.92 97.49 MIR126-201 miRNA vagina (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 36.00 41.38 0.15 100.0 MIR374A-201 miRNA vagina (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 409.00 85.92 1.69 100.0 MIR31-201 miRNA vagina (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 513.00 1.72 2.12 66.36 RNA5S12-201 rRNA vagina (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 6.00 0.02 0.02 100.0 RNA5S12-201 rRNA vagina (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 62.00 0.21 0.26 93.94 RNA5S12-201 rRNA vagina (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 12.00 0.04 0.05 100.0 RNA5S12-201 rRNA vagina (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 48.00 0.16 0.20 100.0 RNA5S12-201 rRNA vagina (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 160.19 0.54 0.66 54.3 RNA5S12-201 rRNA vagina (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 311.00 1.05 1.29 40.97 RNA5S12-201 rRNA vagina (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 60.00 0.20 0.25 83.33 RNA5S12-201 rRNA vagina (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 12.00 0.04 0.05 100.0 RNA5S12-201 rRNA vagina (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 1575.00 5.29 6.51 77.85 RNA5S12-201 rRNA vagina (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 108.72 0.37 0.45 51.77 RNA5S12-201 rRNA vagina (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 72.00 17.82 0.30 100.0 Y_RNA.14-201 misc RNA vagina (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 10.00 13.89 0.04 100.0 RNU5E-1-201 snRNA vagina (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 1423.00 44.54 5.88 100.0 SNORA31-201 snoRNA vagina (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 33.00 2.58 0.14 80.49 RNA5SP389-201 rRNA pseudogene vagina (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 39.00 3.04 0.16 100.0 RNA5SP389-201 rRNA pseudogene vagina (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 947.00 11.04 3.92 59.52 RNU5A-1-201 snRNA vagina (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 449.36 5.24 1.86 75.27 RNU5A-1-201 snRNA vagina (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1414.00 16.48 5.85 65.92 RNU5A-1-201 snRNA vagina (Tissue)