ENCFF310THB

Library Details

Organism: Homo Sapiens
Biosample: vagina (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR812JEU
Description: Part of ENCODE experiment ENCSR812JEU. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's vagina tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 5233.00 88.40 21.64 95.67 MIR130A-201 miRNA vagina (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 639.00 10.79 2.64 56.55 MIR130A-201 miRNA vagina (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 86528.00 97.33 357.82 98.04 MIRLET7F2-201 miRNA vagina (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 47.00 75.81 0.19 100.0 MIR652-201 miRNA vagina (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 3.00 75.00 0.01 100.0 MIR653-201 miRNA vagina (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 5657.00 83.63 23.39 100.0 MIR140-201 miRNA vagina (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 8.00 2.07 0.03 100.0 MIR106B-201 miRNA vagina (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 133.00 34.37 0.55 61.01 MIR106B-201 miRNA vagina (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 8001.00 72.76 33.09 100.0 SNORD41-201 snoRNA vagina (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 1248.00 16.36 5.16 68.5 MT-TF-201 Mt tRNA vagina (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 268.00 3.51 1.11 24.45 MT-TF-201 Mt tRNA vagina (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 987.00 12.94 4.08 100.0 MT-TF-201 Mt tRNA vagina (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 3325.00 49.95 13.75 100.0 MT-TV-201 Mt tRNA vagina (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 737.00 1.61 3.05 100.0 MT-RNR2-201 Mt rRNA vagina (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 22.00 0.05 0.09 100.0 MT-RNR2-201 Mt rRNA vagina (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 42.00 0.09 0.17 100.0 MT-RNR2-201 Mt rRNA vagina (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 22.00 0.05 0.09 100.0 MT-RNR2-201 Mt rRNA vagina (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 2105.00 4.60 8.70 89.42 MT-RNR2-201 Mt rRNA vagina (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 1.00 0.00 0.00 100.0 MT-RNR2-201 Mt rRNA vagina (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 1028.00 2.25 4.25 73.43 MT-RNR2-201 Mt rRNA vagina (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 2536.00 37.53 10.49 94.49 MT-TI-201 Mt tRNA vagina (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 1958.00 28.98 8.10 100.0 MT-TI-201 Mt tRNA vagina (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 22.00 0.02 0.09 100.0 MT-TQ-201 Mt tRNA vagina (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 48337.00 33.29 199.89 97.14 MT-TQ-201 Mt tRNA vagina (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 11052.38 7.61 45.71 48.03 MT-TQ-201 Mt tRNA vagina (Tissue)