ENCFF299ETH

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 67.00 95.71 0.69 98.53 MIR101-2-201 miRNA OCI-LY7 (Cell line)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 2269.00 98.44 23.51 99.13 MIR26A1-201 miRNA OCI-LY7 (Cell line)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 3.00 75.00 0.03 100.0 MIR129-2-201 miRNA OCI-LY7 (Cell line)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 28.00 65.12 0.29 100.0 MIR342-201 miRNA OCI-LY7 (Cell line)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 845.00 93.47 8.76 97.46 MIR148A-201 miRNA OCI-LY7 (Cell line)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 16.00 1.77 0.17 100.0 MIR148A-201 miRNA OCI-LY7 (Cell line)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 115.00 84.56 1.19 99.14 MIR26B-201 miRNA OCI-LY7 (Cell line)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 12.00 80.00 0.12 92.31 MIR148B-201 miRNA OCI-LY7 (Cell line)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 495.00 97.25 5.13 99.8 MIRLET7G-201 miRNA OCI-LY7 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_21_+ 6–21 5.00 0.48 0.05 100.0 MIR30D-201 miRNA OCI-LY7 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 981.00 93.61 10.16 97.9 MIR30D-201 miRNA OCI-LY7 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 25.00 2.39 0.26 54.35 MIR30D-201 miRNA OCI-LY7 (Cell line)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 1.00 50.00 0.01 100.0 MIR374A-201 miRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 464.90 0.43 4.82 58.26 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 542.00 0.50 5.62 82.87 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 632.00 0.58 6.55 100.0 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 2104.00 1.93 21.80 98.83 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 5741.00 5.28 59.48 86.43 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 2328.00 2.14 24.12 73.93 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 3220.00 2.96 33.36 100.0 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 1929.00 1.77 19.99 80.44 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 94.00 0.09 0.97 14.05 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 152.00 0.14 1.57 100.0 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 442.47 0.41 4.58 53.31 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 9546.00 8.78 98.91 99.74 RNA5S12-201 rRNA OCI-LY7 (Cell line)