ENCFF295DXJ

Library Details

Organism: Homo Sapiens
Biosample: smooth muscle cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR250STJ
Description: Part of ENCODE experiment ENCSR250STJ. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a smooth muscle pathway. They are stranded SE101 length Hi-Seq reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 100.00 12.22 0.12 100.0 LINC02422-207 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 164.00 1.40 0.19 100.0 ENST00000753088 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 147.00 1.25 0.17 100.0 ENST00000753088 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 5621.40 14.09 6.60 70.62 ENST00000756336 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 2822.00 7.07 3.31 100.0 ENST00000756336 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 873.00 2.19 1.02 100.0 ENST00000756336 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 1432.00 3.59 1.68 100.0 ENST00000756336 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 1463.50 3.67 1.72 16.66 ENST00000756336 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 8180.04 20.50 9.60 86.98 ENST00000756336 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 198.42 0.50 0.23 17.97 ENST00000756336 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 4190.30 10.50 4.92 59.45 ENST00000756336 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 3572.00 8.95 4.19 100.0 ENST00000756336 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 1411.28 3.54 1.66 87.93 ENST00000756336 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 7.00 20.59 0.01 100.0 ENST00000756452 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 383.00 17.81 0.45 100.0 ENST00000760093 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 156.00 7.26 0.18 100.0 ENST00000760093 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 233149.00 93.55 273.72 97.77 SNHG14-356 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 89809.00 67.98 105.44 94.76 LINC02806-241 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 761.00 0.58 0.89 100.0 LINC02806-241 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 102.00 0.08 0.12 100.0 LINC02806-241 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 15522.00 11.75 18.22 38.99 LINC02806-241 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 472.00 96.33 0.55 100.0 EHBP1-AS1-210 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 545.00 27.68 0.64 100.0 ENST00000770398 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 603.00 30.62 0.71 100.0 ENST00000770398 lncRNA smooth muscle cell (In vitro differentiated cells)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 65.00 3.30 0.08 100.0 ENST00000770398 lncRNA smooth muscle cell (In vitro differentiated cells)