ENCFF295DXJ

Library Details

Organism: Homo Sapiens
Biosample: smooth muscle cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR250STJ
Description: Part of ENCODE experiment ENCSR250STJ. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a smooth muscle pathway. They are stranded SE101 length Hi-Seq reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 5188.00 91.89 6.09 97.39 MIR103A2-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362155.4 ENST00000362155.4_44_64_+ 44–64 4.00 16.00 0.00 100.0 MIR369-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362155.4 ENST00000362155.4_9_29_+ 9–29 20.00 80.00 0.02 100.0 MIR369-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 466.00 45.69 0.55 100.0 MIR425-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 202.00 19.80 0.24 100.0 MIR425-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 972.00 51.67 1.14 100.0 MIR210-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 4379.00 95.95 5.14 96.99 MIR378A-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 492.00 71.10 0.58 100.0 MIR361-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 537.00 75.74 0.63 83.26 MIR101-2-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 45.00 6.35 0.05 29.41 MIR101-2-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362199.3 ENST00000362199.3_51_71_+ 51–71 11.00 55.00 0.01 100.0 MIR323A-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 80076.00 97.37 94.01 98.47 MIR26A1-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 3.00 37.50 0.00 100.0 MIR129-2-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 555.00 74.20 0.65 100.0 MIR342-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 1122.00 0.78 1.32 100.0 MIR148A-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 133901.00 92.81 157.20 93.99 MIR148A-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 615.00 98.09 0.72 100.0 MIR410-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362237.3 ENST00000362237.3_15_37_+ 15–37 15.00 2.92 0.02 100.0 MIR409-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 433.00 84.41 0.51 100.0 MIR409-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 637.00 98.30 0.75 100.0 MIR411-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 3549.00 94.84 4.17 96.78 MIR26B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 1270.00 73.92 1.49 87.47 MIR148B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 153.00 95.62 0.18 100.0 MIRLET7G-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 8849.00 86.74 10.39 97.46 MIR30D-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 558.00 5.47 0.66 70.72 MIR30D-201 miRNA smooth muscle cell (In vitro differentiated cells)