ENCFF276PUU

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 101.00 27.01 0.48 95.28 MIR302CHG-205 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 42.00 11.23 0.20 97.67 MIR302CHG-205 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_490_+ 458–490 7.00 1.87 0.03 100.0 MIR302CHG-205 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 26.00 7.69 0.12 100.0 RPSA-216 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 3477.00 90.41 16.64 99.77 MIR99AHG-370 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 265.00 6.89 1.27 98.88 MIR99AHG-370 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 6224.00 98.72 29.78 100.0 HPS4-237 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 2.00 18.18 0.01 100.0 MEG9-206 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 1.00 9.09 0.00 100.0 MEG9-206 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 5321.00 12.49 25.46 100.0 DNAJC5-203 nonsense mediated decay mesenchymal stem cell (In vitro differentiated cells)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 561.00 6.99 2.68 100.0 ENST00000707189 TEC mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 575.00 0.21 2.75 100.0 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 1452.00 0.53 6.95 100.0 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 75084.80 27.65 359.28 29.94 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 3981.00 1.47 19.05 100.0 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 21.00 0.01 0.10 100.0 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 3508.00 1.29 16.79 100.0 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 2310.00 0.85 11.05 100.0 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 179982.84 66.27 861.22 72.14 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 6.00 0.01 0.03 100.0 SNHG32-223 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 28521.00 66.22 136.47 100.0 SNHG32-223 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 3726.00 8.65 17.83 100.0 SNHG32-223 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 35.00 0.08 0.17 100.0 SNHG32-223 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 6651.00 15.44 31.83 100.0 SNHG32-223 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 522.00 4.86 2.50 100.0 SNHG32-227 lncRNA mesenchymal stem cell (In vitro differentiated cells)